Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 MIR30E-201ENST00000362104 92 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 SNORA1.1-201ENST00000364671 133 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 MIR184-201ENST00000384962 84 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 AC069257.2-201ENST00000441819 155 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 MIR4439-201ENST00000583746 80 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 MIR3922-201ENST00000585192 84 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 MIR6841-201ENST00000637129 72 ntBASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC116Q8IYX3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 RNU6-23P-201ENST00000363283 107 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 SNORD58A-201ENST00000383875 65 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 SNORA9-201ENST00000384215 133 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 SNORA11.4-201ENST00000408823 129 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 RN7SKP192-201ENST00000411291 327 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 AC026403.1-201ENST00000518938 295 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 ELOCP29-201ENST00000588193 334 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC116Q8IYX3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 RNU4-35P-201ENST00000362588 141 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 U8.15-201ENST00000390947 134 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 Y_RNA.611-201ENST00000410682 108 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 AC108729.3-201ENST00000513484 108 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 SNORA74D-201ENST00000516404 141 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 IGKV2-26-201ENST00000518305 343 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 AC006160.2-201ENST00000637708 154 ntBASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC116Q8IYX3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 Y_RNA.4-201ENST00000362333 112 ntBASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 MIR491-201ENST00000384877 84 ntBASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 SNORA31.10-201ENST00000516482 106 ntBASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 AC007336.1-201ENST00000576365 3828 ntBASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 MIR376B-201ENST00000614515 100 ntBASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC116Q8IYX3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 SNORA1.2-201ENST00000365189 134 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 SNORA70.7-201ENST00000384159 133 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 RNU7-34P-201ENST00000459394 64 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 AC007179.3-201ENST00000604976 235 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 AC022513.1-201ENST00000624512 117 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 MIR4662A-201ENST00000637499 67 ntBASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC116Q8IYX3 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 Y_RNA.191-201ENST00000363972 113 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 SNORA32-201ENST00000384072 121 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 Y_RNA.430-201ENST00000384081 110 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 SNORA26.6-201ENST00000391256 115 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 SNORA59A-201ENST00000459326 152 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 AC110768.1-201ENST00000509222 400 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 RNU7-53P-201ENST00000516705 60 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 RNU6-958P-201ENST00000516995 106 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 AC012314.7-201ENST00000619693 93 ntBASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC116Q8IYX3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 RNU6-833P-201ENST00000363486 107 ntBASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 RNU6-652P-201ENST00000365488 107 ntBASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 Y_RNA.370-201ENST00000365589 108 ntBASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 U8.16-201ENST00000391279 133 ntBASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 RNA5SP261-201ENST00000410536 106 ntBASIC3.17□□□□□ -1.9
CCDC116Q8IYX3 AC090844.1-201ENST00000422019 156 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms