Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 SNORD114-30-201ENST00000364448 72 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 RNA5SP126-201ENST00000365092 109 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.630-201ENST00000411370 108 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.651-201ENST00000459380 103 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 RN7SKP179-201ENST00000516126 217 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 RNU7-28P-201ENST00000516759 62 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-1149P-201ENST00000516810 97 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 FO624990.1-201ENST00000636373 85 ntBASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM48Q8IWZ4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.280-201ENST00000364765 112 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-1325P-201ENST00000364905 105 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-215P-201ENST00000365169 102 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-163P-201ENST00000384396 106 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 CALM2P4-201ENST00000430810 426 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 SNRPGP14-201ENST00000435400 219 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 MIR4446-201ENST00000578505 67 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 AC006441.5-201ENST00000612680 209 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 AL590808.1-201ENST00000618696 141 ntBASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM48Q8IWZ4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 AP006437.1-201ENST00000641440 3685 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-44P-201ENST00000384045 107 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 RNU4-53P-201ENST00000410828 140 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 RNA5SP501-201ENST00000410990 112 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-781P-201ENST00000516377 101 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 SNORD53-201ENST00000579969 78 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 AL049779.4-201ENST00000604500 156 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.34□□□□□ -2.03
TRIM48Q8IWZ4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 MIRLET7C-201ENST00000362160 84 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 SNORA40.5-201ENST00000391061 128 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 U8.16-201ENST00000391279 133 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 RNA5SP270-201ENST00000411361 118 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 AC026436.1-201ENST00000510537 270 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 RNA5SP236-201ENST00000516169 116 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 AC108081.1-201ENST00000604358 221 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 AC015726.2-201ENST00000620112 122 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 AC064859.1-201ENST00000624741 174 ntBASIC2.33□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-1056P-201ENST00000383996 107 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-429P-201ENST00000384582 108 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 Y_RNA.563-201ENST00000384707 108 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 RNA5SP465-201ENST00000391195 109 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 RNU2-7P-201ENST00000410794 178 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 MTATP6P21-201ENST00000440681 189 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 SNORD36C-201ENST00000516733 66 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 SCARNA15-202ENST00000516881 127 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 RNA5SP437-201ENST00000517249 129 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 MTND5P34-201ENST00000568888 325 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 SNORA28-201ENST00000606769 126 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 MIR6129-201ENST00000616087 109 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 AC134878.1-201ENST00000619901 243 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 MIR3914-2-201ENST00000637339 95 ntBASIC2.32□□□□□ -2.04
TRIM48Q8IWZ4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 SNORD115-28-201ENST00000363931 81 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 SNORA63D-201ENST00000364359 132 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 RNU1-138P-201ENST00000384093 164 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 SNORA48.1-201ENST00000390879 135 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 RN7SKP200-201ENST00000410564 320 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 AL035461.1-201ENST00000421490 332 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 AL021397.1-201ENST00000451806 248 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 RNA5SP168-201ENST00000516642 112 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 AC046143.2-201ENST00000609789 160 ntBASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
TRIM48Q8IWZ4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-647P-201ENST00000364243 107 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 SNORA2.2-201ENST00000365473 135 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-1189P-201ENST00000383958 107 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 AL034345.1-201ENST00000407768 123 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 AL445646.1-201ENST00000431784 216 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 AC069257.2-201ENST00000441819 155 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 SNORD33.1-201ENST00000516213 88 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 RNA5SP281-201ENST00000516504 135 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 IGKV1-22-201ENST00000524313 326 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms