Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MIR3671-201ENST00000580455 88 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 AC005357.1-201ENST00000588399 301 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 AL442067.1-201ENST00000613261 223 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 AC073349.3-201ENST00000617616 186 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 AC141273.2-201ENST00000618989 130 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-338P-201ENST00000383888 105 ntBASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 SNORA12.1-201ENST00000390873 148 ntBASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-437P-201ENST00000459408 95 ntBASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 MRPS17P9-201ENST00000511924 393 ntBASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 SNORD116-28-201ENST00000516123 91 ntBASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 SNORA31.10-201ENST00000516482 106 ntBASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.97□□□□□ -2.09
KRT28Q7Z3Y7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
KRT28Q7Z3Y7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 SNORD68-201ENST00000363214 84 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-414P-201ENST00000363705 104 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.203-201ENST00000364106 102 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 MLLT10P1-201ENST00000418346 262 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 FTH1P12-201ENST00000432137 551 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 AC100767.1-201ENST00000528178 123 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 MIR5688-201ENST00000580619 83 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 MIR4713-201ENST00000582691 75 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
KRT28Q7Z3Y7 MIR367-201ENST00000362299 68 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-653P-201ENST00000363074 106 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.292-201ENST00000364904 97 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 MIR598-201ENST00000384868 97 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 MIR526A2-201ENST00000390198 65 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 RNA5SP482-201ENST00000391269 118 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 MIR4724-201ENST00000579485 89 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 MIR6078-201ENST00000611069 100 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 JPX_2.1-201ENST00000614161 69 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 AC095038.3-201ENST00000634439 195 ntBASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRT28Q7Z3Y7 MIR126-201ENST00000362291 85 ntBASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 RNU4-41P-201ENST00000364426 143 ntBASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-969P-201ENST00000383900 105 ntBASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-847P-201ENST00000411115 108 ntBASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 AC092991.1-201ENST00000477176 376 ntBASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRT28Q7Z3Y7 U8.1-201ENST00000362843 134 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 SNORA8.3-201ENST00000384679 139 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 MIR1278-201ENST00000408753 81 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-383P-201ENST00000410864 94 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-388P-201ENST00000517012 105 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-389P-201ENST00000517048 105 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-794P-201ENST00000517261 64 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 AL021707.8-201ENST00000609428 183 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 AL591926.4-201ENST00000616895 298 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 AC078938.1-201ENST00000620993 318 ntBASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRT28Q7Z3Y7 RNU4-10P-201ENST00000364383 140 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.253-201ENST00000364562 112 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.257-201ENST00000364596 102 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 RNU1-93P-201ENST00000364704 169 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 SNRPGP10-201ENST00000432323 225 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 AL365265.1-201ENST00000621045 234 ntBASIC1.92□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.24-201ENST00000362508 103 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 Y_RNA.626-201ENST00000411288 95 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 SNRPGP13-201ENST00000442212 177 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 AC023449.1-201ENST00000454464 154 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 RPL23AP91-201ENST00000569211 455 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 MIR4762-201ENST00000585261 75 ntBASIC1.91□□□□□ -2.1
KRT28Q7Z3Y7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.1
KRT28Q7Z3Y7 RNU6-1209P-201ENST00000363655 107 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 U8.5-201ENST00000364528 136 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 MIR626-201ENST00000385032 94 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-131P-201ENST00000391144 107 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 Z98949.2-201ENST00000440996 144 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 AC099513.1-201ENST00000490423 301 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 OR9P1P-201ENST00000496431 281 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 AC130289.1-201ENST00000577321 73 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 AC021506.2-201ENST00000612354 169 ntBASIC1.9□□□□□ -2.11
KRT28Q7Z3Y7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms