Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.44□□□□□ -2.02
E4F1Q66K89 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
E4F1Q66K89 RNA5SP289-201ENST00000362332 137 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 RNU6-508P-201ENST00000363231 103 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 Y_RNA.525-201ENST00000384570 113 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 MIR518F-201ENST00000384973 87 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
E4F1Q66K89 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
E4F1Q66K89 RNA5SP501-201ENST00000410990 112 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 Z92545.1-201ENST00000411782 234 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.43□□□□□ -2.02
E4F1Q66K89 AC114811.1-201ENST00000507207 168 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 RNU7-25P-201ENST00000516544 62 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 RNU2-60P-201ENST00000517290 128 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.43□□□□□ -2.02
E4F1Q66K89 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.43□□□□□ -2.02
E4F1Q66K89 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
E4F1Q66K89 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.42□□□□□ -2.02
E4F1Q66K89 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
E4F1Q66K89 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
E4F1Q66K89 RNU6-268P-201ENST00000364174 107 ntBASIC2.42□□□□□ -2.02
E4F1Q66K89 RNU6-309P-201ENST00000364573 106 ntBASIC2.42□□□□□ -2.02
E4F1Q66K89 SNORA48.1-201ENST00000390879 135 ntBASIC2.42□□□□□ -2.02
E4F1Q66K89 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
E4F1Q66K89 MTND5P32-201ENST00000560711 1802 ntBASIC2.42□□□□□ -2.02
E4F1Q66K89 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
E4F1Q66K89 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
E4F1Q66K89 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
E4F1Q66K89 RNU6-525P-201ENST00000363685 104 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 SNORA63D-201ENST00000364359 132 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 Y_RNA.336-201ENST00000365307 109 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 RNA5SP37-201ENST00000365420 130 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 SNORA67.4-201ENST00000384688 142 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 MIR520A-201ENST00000384862 85 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 SNORD77.3-201ENST00000391113 65 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 MIR891A-201ENST00000401237 79 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 AL603914.1-201ENST00000401964 204 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 AL034345.1-201ENST00000407768 123 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 AC007064.1-201ENST00000412238 351 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 AF228730.3-201ENST00000436691 102 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 HMGN2P32-201ENST00000444648 269 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 AC090049.2-201ENST00000550377 109 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.41□□□□□ -2.02
E4F1Q66K89 AC006441.5-201ENST00000612680 209 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 AC015726.2-201ENST00000620112 122 ntBASIC2.41□□□□□ -2.02
E4F1Q66K89 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
E4F1Q66K89 Y_RNA.114-201ENST00000363265 113 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 SNORA5B-201ENST00000363786 132 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 RNU6-1292P-201ENST00000383856 107 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 RNU6-301P-201ENST00000384277 107 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 RNU6-950P-201ENST00000384651 107 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 CALM2P4-201ENST00000430810 426 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 RNU7-34P-201ENST00000459394 64 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 RPL23AP63-201ENST00000498752 471 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 CYCTP-201ENST00000504253 315 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 RNU6-659P-201ENST00000516454 104 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.4□□□□□ -2.03
E4F1Q66K89 AC121758.2-201ENST00000553271 193 ntBASIC2.4□□□□□ -2.03
E4F1Q66K89 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
E4F1Q66K89 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
E4F1Q66K89 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
E4F1Q66K89 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
E4F1Q66K89 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 RNA5SP138-201ENST00000365098 114 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 Y_RNA.547-201ENST00000384654 119 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 Y_RNA.629-201ENST00000411368 105 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 SNRPGP14-201ENST00000435400 219 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.39□□□□□ -2.03
E4F1Q66K89 MTATP6P21-201ENST00000440681 189 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AL021397.1-201ENST00000451806 248 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.39□□□□□ -2.03
E4F1Q66K89 RN7SKP179-201ENST00000516126 217 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 RNA5SP437-201ENST00000517249 129 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AC133485.4-201ENST00000561835 220 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 SUB1P4-201ENST00000566062 339 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AC138907.4-201ENST00000570107 226 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 MIR3121-201ENST00000579680 77 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AL022345.2-201ENST00000606307 135 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AC134878.1-201ENST00000619901 243 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 AC009831.4-201ENST00000620744 325 ntBASIC2.39□□□□□ -2.03
E4F1Q66K89 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
E4F1Q66K89 MIRLET7C-201ENST00000362160 84 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 SNORD115-28-201ENST00000363931 81 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 RNA5SP160-201ENST00000364866 120 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 MIR221-201ENST00000385135 110 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 U8.16-201ENST00000391279 133 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 RNU6-1061P-201ENST00000516530 99 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 RNU7-193P-201ENST00000516723 65 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 RNU6-1149P-201ENST00000516810 97 ntBASIC2.38□□□□□ -2.03
E4F1Q66K89 RNU6-112P-201ENST00000363599 104 ntBASIC2.37□□□□□ -2.03
E4F1Q66K89 SNORD38C-201ENST00000384381 69 ntBASIC2.37□□□□□ -2.03
E4F1Q66K89 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
E4F1Q66K89 AL158147.1-201ENST00000443970 75 ntBASIC2.37□□□□□ -2.03
E4F1Q66K89 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.37□□□□□ -2.03
E4F1Q66K89 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.37□□□□□ -2.03
E4F1Q66K89 RNU7-12P-201ENST00000516030 62 ntBASIC2.37□□□□□ -2.03
E4F1Q66K89 RNU6-772P-201ENST00000516042 105 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms