Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 HMGN2P32-201ENST00000444648 269 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 RN7SL499P-201ENST00000481141 276 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNVU1-2-201ENST00000516326 135 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 SNORA18.7-201ENST00000516910 131 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR4679-2-201ENST00000578358 77 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 SNORA28-201ENST00000606769 126 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNU6-690P-201ENST00000365242 106 ntBASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 Y_RNA.351-201ENST00000365436 96 ntBASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR181B1-201ENST00000385240 110 ntBASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNA5SP137-201ENST00000516833 135 ntBASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNU7-70P-201ENST00000516941 66 ntBASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 AC007012.1-201ENST00000567192 175 ntBASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1Q5Y7H0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1Q5Y7H0 U8.16-201ENST00000391279 133 ntBASIC2.42□□□□□ -2.02
HLA-DQA1Q5Y7H0 RN7SKP200-201ENST00000410564 320 ntBASIC2.42□□□□□ -2.02
HLA-DQA1Q5Y7H0 COX6CP6-201ENST00000490840 228 ntBASIC2.42□□□□□ -2.02
HLA-DQA1Q5Y7H0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
HLA-DQA1Q5Y7H0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DQA1Q5Y7H0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 AC062016.1-201ENST00000355719 319 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR342-201ENST00000362212 99 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR450A1-201ENST00000362262 91 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 Y_RNA.116-201ENST00000363292 103 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNU1-133P-201ENST00000364867 167 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 SNORD38C-201ENST00000384381 69 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 Y_RNA.549-201ENST00000384657 102 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR570-201ENST00000384917 97 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR518A2-201ENST00000384966 87 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNA5SP210-201ENST00000391034 120 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 AL590004.2-201ENST00000404787 371 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNY4P20-201ENST00000516678 93 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 HSPE1P19-201ENST00000603327 295 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 uc_338.28-201ENST00000612082 187 ntBASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1Q5Y7H0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DQA1Q5Y7H0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.02
HLA-DQA1Q5Y7H0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DQA1Q5Y7H0 SNORA25.6-201ENST00000364121 118 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNORA63D-201ENST00000364359 132 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.494-201ENST00000384432 111 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 AL034345.1-201ENST00000407768 123 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP89-201ENST00000410300 108 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC015922.2-201ENST00000435593 184 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC069257.2-201ENST00000441819 155 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC087499.4-201ENST00000448505 178 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP168-201ENST00000516642 112 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC027279.3-201ENST00000625055 122 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 AL596211.1-201ENST00000569873 2277 ntBASIC2.4□□□□□ -2.03
HLA-DQA1Q5Y7H0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.281-201ENST00000364774 94 ntBASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNY1P6-201ENST00000384193 109 ntBASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNX2P2-201ENST00000424553 323 ntBASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP282-201ENST00000516355 108 ntBASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC021443.1-201ENST00000604478 211 ntBASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DQA1Q5Y7H0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-1107P-201ENST00000364817 104 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-424P-201ENST00000384367 105 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-106P-201ENST00000384405 107 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNORD12C-201ENST00000386307 89 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 MT-TI-201ENST00000387365 69 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 HMGN2P39-201ENST00000398005 273 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU7-12P-201ENST00000516030 62 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-168P-201ENST00000516189 101 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-412P-201ENST00000516434 106 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 SUMO2P16-201ENST00000519475 264 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC091932.4-201ENST00000623386 200 ntBASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.198-201ENST00000364013 98 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.241-201ENST00000364470 117 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 U8.17-201ENST00000391292 132 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU2-7P-201ENST00000410794 178 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP501-201ENST00000410990 112 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 AL031737.1-201ENST00000450125 223 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC093850.1-201ENST00000454121 251 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU7-80P-201ENST00000459562 61 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 307.9 ms