Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU7-53P-201ENST00000516705 60 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 RNU6-54P-201ENST00000365563 107 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 MIR652-201ENST00000385278 98 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 RNA5SP20-201ENST00000515976 84 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 AC097460.3-201ENST00000623099 442 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 AC008873.1-201ENST00000625051 138 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-960P-201ENST00000364056 120 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-949P-201ENST00000384040 107 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 MIR522-201ENST00000385071 87 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 SNORD12C-201ENST00000386307 89 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU2-39P-201ENST00000410604 198 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AL353691.2-201ENST00000443795 59 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-437P-201ENST00000459408 95 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-175P-201ENST00000516896 107 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-324P-201ENST00000363957 106 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AC018880.2-201ENST00000414265 201 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU7-181P-201ENST00000517234 74 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AC127455.1-201ENST00000565496 145 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AC006435.5-201ENST00000624486 112 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AL138960.2-201ENST00000625145 535 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-194P-201ENST00000363862 105 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNU6-291P-201ENST00000384720 107 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 MTCYBP4-201ENST00000401524 249 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AC104576.1-201ENST00000524225 88 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 AC012409.4-201ENST00000612923 249 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 MIR8068-201ENST00000618032 68 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 MTND1P7-201ENST00000632801 297 ntBASIC-1.13□□□□□ -2.59
VPS13DQ5THJ4 RNY3P11-201ENST00000364153 102 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 RNU6-853P-201ENST00000364306 107 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 RNU6-744P-201ENST00000365557 107 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 MIR548I2-201ENST00000408348 149 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 AL049861.1-201ENST00000603130 150 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 AC072039.2-201ENST00000608883 439 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 RNU6-227P-201ENST00000362865 103 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 RNY1P11-201ENST00000363759 113 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 SNORA43.4-201ENST00000629559 138 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 AC097635.1-201ENST00000450678 155 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 AC011603.4-201ENST00000611325 277 ntBASIC-1.14□□□□□ -2.59
VPS13DQ5THJ4 RNU4-20P-201ENST00000365601 151 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RNU2-14P-201ENST00000411053 191 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 SEPT14P24-201ENST00000447236 180 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 SEPT14P4-201ENST00000513445 186 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 HIF1AP1-201ENST00000553642 175 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 AL357078.3-201ENST00000607528 618 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RNU6-449P-201ENST00000383914 107 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RNU6-128P-201ENST00000383976 107 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RNU6-400P-201ENST00000391173 106 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RNA5SP237-201ENST00000410414 113 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RNU6-190P-201ENST00000384154 102 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 MIR190B-201ENST00000401119 79 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RPS3AP52-201ENST00000435639 297 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 AL136370.1-201ENST00000608166 691 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 RNY3P4-201ENST00000384428 101 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 MIR626-201ENST00000385032 94 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 AC109479.2-201ENST00000517842 174 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 AP001836.1-201ENST00000604675 523 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 PART1_1.1-201ENST00000611761 217 ntBASIC-1.15□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.16□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.16□□□□□ -2.59
VPS13DQ5THJ4 RNU4-10P-201ENST00000364383 140 ntBASIC-1.16□□□□□ -2.59
VPS13DQ5THJ4 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.16□□□□□ -2.59
VPS13DQ5THJ4 MTCO3P8-201ENST00000453691 755 ntBASIC-1.16□□□□□ -2.59
VPS13DQ5THJ4 AC069503.3-201ENST00000618674 145 ntBASIC-1.16□□□□□ -2.59
VPS13DQ5THJ4 RNU6-208P-201ENST00000362431 107 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 RNU6-830P-201ENST00000516353 107 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 AC055872.1-201ENST00000570978 278 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 AC022441.3-201ENST00000605737 136 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 RNU6-442P-201ENST00000383968 104 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 RNU6-891P-201ENST00000384280 111 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms