Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC005000.2-201ENST00000605468 310 ntBASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 MFSD8-233ENST00000641482 4860 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 RNU1-18P-201ENST00000363062 164 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 MIR34C-201ENST00000384831 77 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 MIR206-201ENST00000384872 86 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 SNORA48.2-201ENST00000390926 124 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-380P-201ENST00000410207 107 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 RNU1-98P-201ENST00000458992 160 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 RN7SKP83-201ENST00000516512 178 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 RNU7-53P-201ENST00000516705 60 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 MIR3134-201ENST00000579433 74 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 PWAR6-201ENST00000552334 4618 ntBASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNFT1Q5M7Z0 AL356274.2-201ENST00000624379 3752 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-283P-201ENST00000364788 107 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 CST2P1-201ENST00000425770 87 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 RN7SL636P-201ENST00000497504 294 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-917P-201ENST00000516294 104 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 MIR8057-201ENST00000620957 69 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 AC027279.3-201ENST00000625055 122 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 AC096644.4-201ENST00000563417 2912 ntBASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.1□□□□□ -1.91
RNFT1Q5M7Z0 ICE2P2-201ENST00000483823 2787 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 MIRLET7A1-201ENST00000362295 80 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 Y_RNA.173-201ENST00000363776 113 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 SNORA38.1-201ENST00000364172 131 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 SNORA1.2-201ENST00000365189 134 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 MIR95-201ENST00000385072 81 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-1307P-201ENST00000391012 103 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 RNU4-37P-201ENST00000410214 84 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 RN7SKP111-201ENST00000410349 271 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 RN7SKP192-201ENST00000411291 327 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 AL450471.1-201ENST00000447509 127 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 RNU7-153P-201ENST00000516455 62 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 RNU7-181P-201ENST00000517234 74 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 MIR6717-201ENST00000622747 73 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RNFT1Q5M7Z0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 MIR128-1-201ENST00000384921 82 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-519P-201ENST00000410590 108 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 RNU2-48P-201ENST00000410694 191 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 AC015922.2-201ENST00000435593 184 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 SCARNA18B-201ENST00000458806 135 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-826P-201ENST00000516827 104 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 MIR4276-201ENST00000584832 70 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RNFT1Q5M7Z0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-480P-201ENST00000384332 107 ntBASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-163P-201ENST00000384396 106 ntBASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 ATP5J2P3-201ENST00000451550 258 ntBASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 RPS29P12-201ENST00000460178 152 ntBASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 MIR5680-201ENST00000577577 84 ntBASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 MIR5739-201ENST00000619803 80 ntBASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 CEP170P1-201ENST00000502249 4587 ntBASIC3.07□□□□□ -1.92
RNFT1Q5M7Z0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 RNU1-23P-201ENST00000363361 144 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms