Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 MIR802-201ENST00000390235 94 ntBASIC3.2□□□□□ -1.9
CDCA8Q53HL2 RNA5SP109-201ENST00000391010 116 ntBASIC3.2□□□□□ -1.9
CDCA8Q53HL2 RN7SKP200-201ENST00000410564 320 ntBASIC3.2□□□□□ -1.9
CDCA8Q53HL2 AL158823.1-201ENST00000418441 478 ntBASIC3.2□□□□□ -1.9
CDCA8Q53HL2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.2□□□□□ -1.9
CDCA8Q53HL2 RNU6-113P-201ENST00000516653 101 ntBASIC3.2□□□□□ -1.9
CDCA8Q53HL2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDCA8Q53HL2 RNU6-268P-201ENST00000364174 107 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 RNU6-215P-201ENST00000365169 102 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 RNU1-138P-201ENST00000384093 164 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDCA8Q53HL2 SNORA48.1-201ENST00000390879 135 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 SNORD77.3-201ENST00000391113 65 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 SNORA3.2-201ENST00000408221 125 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 Y_RNA.617-201ENST00000410920 90 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 RN7SKP192-201ENST00000411291 327 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 AC007064.1-201ENST00000412238 351 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 RNA5SP236-201ENST00000516169 116 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 MIR6766-201ENST00000622641 72 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 ZNF658B-202ENST00000615961 3375 ntBASIC3.19□□□□□ -1.9
CDCA8Q53HL2 AL442644.1-201ENST00000454390 3105 ntBASIC3.18□□□□□ -1.9
CDCA8Q53HL2 RNA5SP432-201ENST00000362480 116 ntBASIC3.18□□□□□ -1.9
CDCA8Q53HL2 RNA5SP425-201ENST00000410336 112 ntBASIC3.18□□□□□ -1.9
CDCA8Q53HL2 RNU6-1270P-201ENST00000517128 108 ntBASIC3.18□□□□□ -1.9
CDCA8Q53HL2 SUB1P4-201ENST00000566062 339 ntBASIC3.18□□□□□ -1.9
CDCA8Q53HL2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDCA8Q53HL2 AC245060.5-201ENST00000610778 3293 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 SNORA80E-201ENST00000384744 137 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 RN7SL429P-201ENST00000479090 223 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 RN7SL489P-201ENST00000486185 223 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 RN7SL327P-201ENST00000488659 223 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 MIR5094-201ENST00000578766 85 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.17□□□□□ -1.9
CDCA8Q53HL2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.17□□□□□ -1.9
CDCA8Q53HL2 RN7SL853P-201ENST00000617250 223 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.17□□□□□ -1.9
CDCA8Q53HL2 AC010297.1-201ENST00000623948 149 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 U6.95-201ENST00000636931 70 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 MIR3914-2-201ENST00000637339 95 ntBASIC3.17□□□□□ -1.9
CDCA8Q53HL2 RNU6-309P-201ENST00000364573 106 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 RNU6-1056P-201ENST00000383996 107 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 HMGN2P3-201ENST00000433603 273 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 HMGN2P5-201ENST00000436882 273 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 RNU7-107P-201ENST00000459121 61 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 CYCTP-201ENST00000504253 315 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 SNORA31.10-201ENST00000516482 106 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 MIR5197-201ENST00000583721 112 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 MIR4658-201ENST00000584344 65 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 AL049779.4-201ENST00000604500 156 ntBASIC3.16□□□□□ -1.9
CDCA8Q53HL2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDCA8Q53HL2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDCA8Q53HL2 MIRLET7C-201ENST00000362160 84 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 RNU1-51P-201ENST00000365345 176 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 SNORD20-201ENST00000384550 80 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 AL034345.1-201ENST00000407768 123 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 MIR548O-201ENST00000408583 114 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 Z98742.3-201ENST00000418637 326 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 AC087499.4-201ENST00000448505 178 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 AC011753.1-201ENST00000451001 220 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.15□□□□□ -1.91
CDCA8Q53HL2 RNU6-830P-201ENST00000516353 107 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 SNORA31.15-201ENST00000516771 132 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 SCARNA15-202ENST00000516881 127 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 MIR1273D-201ENST00000577266 86 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 MIR3945-201ENST00000581853 98 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 U1.36-201ENST00000620684 176 ntBASIC3.15□□□□□ -1.91
CDCA8Q53HL2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.15□□□□□ -1.91
CDCA8Q53HL2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDCA8Q53HL2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CDCA8Q53HL2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CDCA8Q53HL2 MTND5P32-201ENST00000560711 1802 ntBASIC3.14□□□□□ -1.91
CDCA8Q53HL2 Y_RNA.294-201ENST00000364916 102 ntBASIC3.14□□□□□ -1.91
CDCA8Q53HL2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.14□□□□□ -1.91
CDCA8Q53HL2 AL022345.2-201ENST00000606307 135 ntBASIC3.14□□□□□ -1.91
CDCA8Q53HL2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDCA8Q53HL2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDCA8Q53HL2 SNORD115-28-201ENST00000363931 81 ntBASIC3.13□□□□□ -1.91
CDCA8Q53HL2 SNORA70B-201ENST00000384210 135 ntBASIC3.13□□□□□ -1.91
CDCA8Q53HL2 Y_RNA.547-201ENST00000384654 119 ntBASIC3.13□□□□□ -1.91
CDCA8Q53HL2 MIR520A-201ENST00000384862 85 ntBASIC3.13□□□□□ -1.91
CDCA8Q53HL2 MIR597-201ENST00000384968 97 ntBASIC3.13□□□□□ -1.91
CDCA8Q53HL2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA8Q53HL2 RNA5SP200-201ENST00000516360 103 ntBASIC3.13□□□□□ -1.91
CDCA8Q53HL2 RNU6-919P-201ENST00000516731 104 ntBASIC3.13□□□□□ -1.91
CDCA8Q53HL2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDCA8Q53HL2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDCA8Q53HL2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.13□□□□□ -1.91
CDCA8Q53HL2 RNU6-235P-201ENST00000362644 107 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 RNU6-833P-201ENST00000363486 107 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 RNU6-1189P-201ENST00000383958 107 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 MIR524-201ENST00000385242 87 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 RN7SKP223-201ENST00000410582 62 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.12□□□□□ -1.91
CDCA8Q53HL2 STAG3L5P-204ENST00000443759 179 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 Y_RNA.651-201ENST00000459380 103 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 RNU6-772P-201ENST00000516042 105 ntBASIC3.12□□□□□ -1.91
CDCA8Q53HL2 Y_RNA.37-201ENST00000362606 108 ntBASIC3.11□□□□□ -1.91
CDCA8Q53HL2 SNORA67.1-201ENST00000364749 141 ntBASIC3.11□□□□□ -1.91
CDCA8Q53HL2 MIRLET7F2-201ENST00000385277 83 ntBASIC3.11□□□□□ -1.91
CDCA8Q53HL2 RNU6-1064P-201ENST00000410626 104 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms