Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 AC099654.10-201ENST00000640395 161 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC38Q502W7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC38Q502W7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC38Q502W7 AC068700.1-201ENST00000565862 3754 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
CCDC38Q502W7 Y_RNA.117-201ENST00000363294 101 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 RNU6-740P-201ENST00000364734 105 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 Y_RNA.396-201ENST00000383949 103 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 MIR516B2-201ENST00000385190 85 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC38Q502W7 AL353621.2-201ENST00000605340 133 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.53□□□□□ -2.16
CCDC38Q502W7 AL442644.1-201ENST00000454390 3105 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.82-201ENST00000363000 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.92-201ENST00000363043 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.235-201ENST00000364412 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.306-201ENST00000365015 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.312-201ENST00000365089 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.322-201ENST00000365151 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 SNORD38C-201ENST00000384381 69 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.556-201ENST00000384677 113 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 MIR1302-3-201ENST00000408128 138 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 RPL39P39-201ENST00000455840 151 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.650-201ENST00000459002 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.777-201ENST00000516982 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.771-201ENST00000598668 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 AL021707.8-201ENST00000609428 183 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CCDC38Q502W7 Y_RNA.789-201ENST00000622480 102 ntBASIC1.52□□□□□ -2.17
CCDC38Q502W7 MIR517C-201ENST00000385103 95 ntBASIC1.51□□□□□ -2.17
CCDC38Q502W7 SNORD2.1-201ENST00000458762 69 ntBASIC1.51□□□□□ -2.17
CCDC38Q502W7 SNORA74.3-201ENST00000517108 154 ntBASIC1.51□□□□□ -2.17
CCDC38Q502W7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC38Q502W7 AC006006.1-201ENST00000603082 144 ntBASIC1.51□□□□□ -2.17
CCDC38Q502W7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC38Q502W7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 Y_RNA.288-201ENST00000364854 92 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 SNORA8.3-201ENST00000384679 139 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 SNRPGP14-201ENST00000435400 219 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 RNU6-947P-201ENST00000516264 106 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 uc_338.4-201ENST00000616635 176 ntBASIC1.5□□□□□ -2.17
CCDC38Q502W7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC38Q502W7 RNU6-268P-201ENST00000364174 107 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 SNORD72-201ENST00000390994 80 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 AL603910.2-201ENST00000407268 136 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 SNORD111.1-201ENST00000516421 86 ntBASIC1.49□□□□□ -2.17
CCDC38Q502W7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC38Q502W7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC38Q502W7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC38Q502W7 MIR568-201ENST00000385036 95 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC38Q502W7 AL118496.2-201ENST00000448300 230 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 SNORD127-201ENST00000458892 86 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 SNORA18.7-201ENST00000516910 131 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC38Q502W7 MIR4282-201ENST00000583613 67 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 AC012433.1-201ENST00000588916 398 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 AC006441.5-201ENST00000612680 209 ntBASIC1.48□□□□□ -2.17
CCDC38Q502W7 RNU4-10P-201ENST00000364383 140 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 MIR626-201ENST00000385032 94 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 MIR150-201ENST00000385048 84 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 RNU6-651P-201ENST00000411040 105 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 BTF3P4-201ENST00000418852 495 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC38Q502W7 RNU6-830P-201ENST00000516353 107 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 RNU7-149P-201ENST00000516739 59 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 MIR4498-201ENST00000577599 66 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 AL049861.1-201ENST00000603130 150 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 snoU13.31-201ENST00000607291 104 ntBASIC1.47□□□□□ -2.17
CCDC38Q502W7 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 RNA5SP327-201ENST00000362494 101 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 Y_RNA.122-201ENST00000363331 96 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 RNU6-1138P-201ENST00000365359 106 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 MIR548H3-201ENST00000408771 118 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 RNU4-62P-201ENST00000410125 130 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 RNU2-38P-201ENST00000410856 79 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 AC245047.8-201ENST00000456455 284 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 SNORD123-201ENST00000459473 70 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 SNORA31.4-201ENST00000516049 129 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 RNU7-43P-201ENST00000516554 64 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 AC100767.1-201ENST00000528178 123 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms