Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU6-1138P-201ENST00000365359 106 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 MIR452-201ENST00000385020 85 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.587-201ENST00000391210 103 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 PIGPP3-201ENST00000425307 415 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 RNA5SP182-201ENST00000516064 82 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 SUMO2P16-201ENST00000519475 264 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 AC015688.6-201ENST00000577737 104 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 WWP1P1-201ENST00000466609 2769 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-200P-201ENST00000364743 107 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 RNA5SP259-201ENST00000365541 109 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 MIR934-201ENST00000401241 83 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 SUMO2P12-201ENST00000405924 140 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 HSPE1P24-201ENST00000450782 238 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 AL138752.1-201ENST00000452964 351 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 SNORD77.4-201ENST00000516158 81 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 RNA5SP364-201ENST00000516938 78 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 AC130289.1-201ENST00000577321 73 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 AP000942.3-201ENST00000603702 160 ntBASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CCDC144BQ3MJ40 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 SNORA26-201ENST00000391286 122 ntBASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 RN7SKP51-201ENST00000410781 304 ntBASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-1116P-201ENST00000517269 99 ntBASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 MIR4778-201ENST00000577635 80 ntBASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 SNRPGP19-201ENST00000603826 189 ntBASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 uc_338.20-201ENST00000621563 178 ntBASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 MIR8063-201ENST00000621930 81 ntBASIC2.24□□□□□ -2.05
CCDC144BQ3MJ40 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-1020P-201ENST00000363684 107 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 snoU2_19.4-201ENST00000364329 80 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.572-201ENST00000384757 98 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-493P-201ENST00000391321 108 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 AL445685.2-201ENST00000422551 342 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 AC245047.8-201ENST00000456455 284 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-322P-201ENST00000516010 103 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.676-201ENST00000516393 96 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 RNU7-149P-201ENST00000516739 59 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-794P-201ENST00000517261 64 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 MIR5089-201ENST00000580047 84 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 MIR4744-201ENST00000581563 82 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 Pinc.1-201ENST00000616452 154 ntBASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-923P-201ENST00000364753 107 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.297-201ENST00000364950 91 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.435-201ENST00000384095 112 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 SNORD38C-201ENST00000384381 69 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 AL606845.1-201ENST00000404881 255 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 RNY3P16-201ENST00000516338 101 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 MIR4422-201ENST00000581938 83 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.22□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.238-201ENST00000364441 102 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.338-201ENST00000365320 114 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 SNORA2.2-201ENST00000365473 135 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 RNU4-70P-201ENST00000384579 139 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 MIR15B-201ENST00000385045 98 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 AC093850.1-201ENST00000454121 251 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 AC005908.1-201ENST00000468701 347 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 AC079140.2-201ENST00000506193 142 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-1299P-201ENST00000516316 100 ntBASIC2.21□□□□□ -2.06
CCDC144BQ3MJ40 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-728P-201ENST00000365375 104 ntBASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-1065P-201ENST00000384513 106 ntBASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.571-201ENST00000384753 98 ntBASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 RNU1-78P-201ENST00000391248 165 ntBASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 SNORA79-201ENST00000408376 140 ntBASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 RN7SL274P-201ENST00000492268 272 ntBASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC144BQ3MJ40 SNORD1A-201ENST00000364968 72 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-1318P-201ENST00000365389 103 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.793-201ENST00000411222 111 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 AC003989.2-201ENST00000440224 169 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.644-201ENST00000459006 113 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 SCARNA8-201ENST00000515924 131 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.797-201ENST00000515977 94 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.674-201ENST00000516362 113 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 AC006441.5-201ENST00000612680 209 ntBASIC2.19□□□□□ -2.06
CCDC144BQ3MJ40 MIR302D-201ENST00000362275 68 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.274-201ENST00000364714 101 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.432-201ENST00000384087 111 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 MIR136-201ENST00000385207 82 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 MIR653-201ENST00000385279 96 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 SNORD72-201ENST00000390994 80 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 SNX2P2-201ENST00000424553 323 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 RNA5SP153-201ENST00000516498 76 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-453P-201ENST00000516819 85 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 AC090049.2-201ENST00000550377 109 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 MIR4308-201ENST00000580634 81 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms