Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 RNU1-142P-201ENST00000516682 145 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 RNU6-341P-201ENST00000516973 96 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 AL160236.1-201ENST00000556317 195 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 MIR3646-201ENST00000578301 84 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 AL031274.2-201ENST00000599419 203 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 AC022513.1-201ENST00000624512 117 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 MIR6079-201ENST00000635807 62 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 AC018630.2-201ENST00000534866 2403 ntBASIC2.21□□□□□ -2.06
SF3B3Q15393 RNU6-862P-201ENST00000362804 105 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 RNU6-1080P-201ENST00000383982 107 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 Y_RNA.586-201ENST00000391146 98 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.2□□□□□ -2.06
SF3B3Q15393 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.2□□□□□ -2.06
SF3B3Q15393 RNA5SP272-201ENST00000516095 111 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 RNU6-197P-201ENST00000516680 100 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 AC024995.1-201ENST00000523014 93 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.2□□□□□ -2.06
SF3B3Q15393 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SF3B3Q15393 RNU6-661P-201ENST00000362409 107 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 Y_RNA.393-201ENST00000383936 102 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 Y_RNA.432-201ENST00000384087 111 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 SNORA79-201ENST00000408376 140 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 RNU6-257P-201ENST00000410238 98 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 RPS27P1-201ENST00000450552 247 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 RNU7-197P-201ENST00000458836 62 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 RNU6-1299P-201ENST00000516316 100 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 Y_RNA.676-201ENST00000516393 96 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 RNU6-1291P-201ENST00000516591 104 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 AL358944.1-201ENST00000528537 144 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 AC112693.2-201ENST00000556538 232 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 MIR4299-201ENST00000577899 72 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 MIR378D2-201ENST00000580636 98 ntBASIC2.19□□□□□ -2.06
SF3B3Q15393 Y_RNA.4-201ENST00000362333 112 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 SNORA16.1-201ENST00000364597 132 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 RNU6-1138P-201ENST00000365359 106 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 RNU6-597P-201ENST00000365620 102 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 Y_RNA.521-201ENST00000384560 114 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 SNORA67.5-201ENST00000391036 107 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 MIR513C-201ENST00000401352 84 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 RPL30P13-201ENST00000418873 348 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.18□□□□□ -2.06
SF3B3Q15393 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.18□□□□□ -2.06
SF3B3Q15393 AC233266.1-201ENST00000454518 96 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 HMGN1P7-201ENST00000491722 313 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 AL163195.1-201ENST00000496941 348 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 SNORA25.12-201ENST00000516202 82 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 AC097639.2-201ENST00000603159 172 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 AC242852.1-201ENST00000612151 96 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 AC244015.1-201ENST00000622301 99 ntBASIC2.18□□□□□ -2.06
SF3B3Q15393 AC010332.2-201ENST00000613083 1904 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 RNU1-58P-201ENST00000362413 163 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 RNU6-199P-201ENST00000362954 107 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 RNU6-23P-201ENST00000363283 107 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 Y_RNA.253-201ENST00000364562 112 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 MIR29C-201ENST00000385231 88 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SF3B3Q15393 Y_RNA.621-201ENST00000411065 96 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 BTF3P4-201ENST00000418852 495 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 AC023449.1-201ENST00000454464 154 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 NDUFA4P2-201ENST00000489989 244 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 RNA5SP153-201ENST00000516498 76 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 RNU7-149P-201ENST00000516739 59 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.17□□□□□ -2.06
SF3B3Q15393 AC120024.3-201ENST00000603167 156 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 JPX_2.1-201ENST00000614161 69 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 AC091895.1-201ENST00000624494 256 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 MIR6844-201ENST00000637122 62 ntBASIC2.17□□□□□ -2.06
SF3B3Q15393 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 RNU6-978P-201ENST00000364371 103 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 Y_RNA.267-201ENST00000364679 109 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 Y_RNA.634-201ENST00000364811 113 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 RNU6-959P-201ENST00000384671 107 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 SNORD37.2-201ENST00000391075 66 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 RNU4-62P-201ENST00000410125 130 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.16□□□□□ -2.06
SF3B3Q15393 RNU7-94P-201ENST00000459576 63 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 AC092991.1-201ENST00000477176 376 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 OR9P1P-201ENST00000496431 281 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 snoU13.31-201ENST00000607291 104 ntBASIC2.16□□□□□ -2.06
SF3B3Q15393 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SF3B3Q15393 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
SF3B3Q15393 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SF3B3Q15393 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.15□□□□□ -2.07
SF3B3Q15393 SNORA1B-201ENST00000362535 133 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 Y_RNA.91-201ENST00000363042 107 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 Y_RNA.291-201ENST00000364886 113 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 SNORA75.5-201ENST00000391291 81 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 RNU6-588P-201ENST00000410281 105 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 SNRPGP10-201ENST00000432323 225 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 AP002004.2-201ENST00000531656 154 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 MIR4662B-201ENST00000579498 81 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 AC005786.1-201ENST00000588553 154 ntBASIC2.15□□□□□ -2.07
SF3B3Q15393 MIR502-201ENST00000606349 86 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms