Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LAPTM4AQ15012 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
LAPTM4AQ15012 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.4□□□□□ -1.87
LAPTM4AQ15012 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.4□□□□□ -1.87
LAPTM4AQ15012 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
LAPTM4AQ15012 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LAPTM4AQ15012 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
LAPTM4AQ15012 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNY1P2-201ENST00000364820 117 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNA5SP479-201ENST00000364858 117 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNA5SP283-201ENST00000365604 119 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNU1-13P-201ENST00000384499 162 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 MIR516B2-201ENST00000385190 85 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNA5SP424-201ENST00000390988 115 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNA5SP482-201ENST00000391269 118 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 SNORA3.3-201ENST00000408712 125 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.39□□□□□ -1.87
LAPTM4AQ15012 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.39□□□□□ -1.87
LAPTM4AQ15012 HMGN2P21-201ENST00000447764 270 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 RNU6-586P-201ENST00000517265 104 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 MIR8053-201ENST00000613344 75 ntBASIC3.39□□□□□ -1.87
LAPTM4AQ15012 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LAPTM4AQ15012 SNORA38-201ENST00000363946 132 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 Y_RNA.283-201ENST00000364798 112 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 MIR548U-201ENST00000390728 81 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 SNRPGP12-201ENST00000449481 213 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 SNORD108-201ENST00000459332 71 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 AC091153.1-201ENST00000466297 402 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 RN7SL323P-201ENST00000494712 295 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 SCARNA14-201ENST00000516903 136 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 MIR4500-201ENST00000579472 76 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 MIR4765-201ENST00000585007 77 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 AC006023.1-201ENST00000603944 259 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 MIR8065-201ENST00000620577 100 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 AC034229.5-201ENST00000624258 185 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 AC112200.1-201ENST00000625015 234 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 RNA5SP196-201ENST00000625967 102 ntBASIC3.38□□□□□ -1.87
LAPTM4AQ15012 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.38□□□□□ -1.87
LAPTM4AQ15012 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LAPTM4AQ15012 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.38□□□□□ -1.87
LAPTM4AQ15012 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LAPTM4AQ15012 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LAPTM4AQ15012 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 Y_RNA.207-201ENST00000364142 106 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 SNORD28B-201ENST00000390993 75 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 MIR1262-201ENST00000408276 93 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 ARF4P2-201ENST00000430209 526 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 RNU7-94P-201ENST00000459576 63 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 RNA5SP164-201ENST00000516533 110 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 SNORA74.3-201ENST00000517108 154 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 AL356280.1-201ENST00000603614 379 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 AP000753.3-201ENST00000604083 169 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 uc_338.14-201ENST00000613162 166 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
LAPTM4AQ15012 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LAPTM4AQ15012 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LAPTM4AQ15012 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LAPTM4AQ15012 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
LAPTM4AQ15012 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 RNU6-50P-201ENST00000362356 103 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 MIR30B-201ENST00000384850 88 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LAPTM4AQ15012 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LAPTM4AQ15012 BX276092.1-201ENST00000427368 251 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 STAG3L5P-204ENST00000443759 179 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 RPL23AP6-201ENST00000446637 472 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 RNU7-73P-201ENST00000458743 63 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 RPS27P21-201ENST00000486977 252 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 MIR6875-201ENST00000617506 72 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 AC243994.1-201ENST00000618627 109 ntBASIC3.36□□□□□ -1.87
LAPTM4AQ15012 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LAPTM4AQ15012 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
LAPTM4AQ15012 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 MIRLET7C-201ENST00000362160 84 ntBASIC3.35□□□□□ -1.87
LAPTM4AQ15012 SNORA1.2-201ENST00000365189 134 ntBASIC3.35□□□□□ -1.87
LAPTM4AQ15012 SNORA24-201ENST00000384096 131 ntBASIC3.35□□□□□ -1.87
LAPTM4AQ15012 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
LAPTM4AQ15012 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LAPTM4AQ15012 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LAPTM4AQ15012 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LAPTM4AQ15012 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LAPTM4AQ15012 AL596028.1-201ENST00000326971 197 ntBASIC3.34□□□□□ -1.87
LAPTM4AQ15012 Y_RNA.42-201ENST00000362660 108 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms