Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 uc_338.22-201ENST00000622722 187 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 AC134026.1-201ENST00000623249 2239 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RNU6-654P-201ENST00000364373 107 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 Y_RNA.439-201ENST00000384119 94 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RNU6-342P-201ENST00000384521 104 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RNU6-308P-201ENST00000390957 107 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 SNORA26.5-201ENST00000391215 123 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RPS3AP1-201ENST00000413190 320 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 AL392103.1-201ENST00000447000 198 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RNU7-141P-201ENST00000459304 62 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RPL23AP54-201ENST00000495129 419 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.64□□□□□ -2.31
SMARCB1Q12824 RNU6-1046P-201ENST00000516538 107 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RNU7-43P-201ENST00000516554 64 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RNU7-116P-201ENST00000516940 62 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.64□□□□□ -2.31
SMARCB1Q12824 AC109810.1-201ENST00000534066 224 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 MIR548AR-201ENST00000582191 57 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 AL512605.2-201ENST00000592972 256 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 RPS29P30-201ENST00000600975 111 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 Y_RNA.804-201ENST00000615262 101 ntBASIC0.64□□□□□ -2.31
SMARCB1Q12824 Y_RNA.31-201ENST00000362574 102 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 Y_RNA.383-201ENST00000383855 97 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 Y_RNA.418-201ENST00000384029 102 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 Y_RNA.419-201ENST00000384041 102 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 Y_RNA.471-201ENST00000384312 102 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 MIR570-201ENST00000384917 97 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 SNORD72-201ENST00000390994 80 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 Y_RNA.645-201ENST00000391229 102 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 AL603910.2-201ENST00000407268 136 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 AC236972.2-201ENST00000434979 310 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 HMGN2P32-201ENST00000444648 269 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
SMARCB1Q12824 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.63□□□□□ -2.31
SMARCB1Q12824 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SMARCB1Q12824 AC005357.1-201ENST00000588399 301 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 AL133255.1-201ENST00000606374 441 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 PVT1_3.1-201ENST00000620853 95 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.63□□□□□ -2.31
SMARCB1Q12824 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
SMARCB1Q12824 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
SMARCB1Q12824 MIR369-201ENST00000362155 70 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 RNU6-268P-201ENST00000364174 107 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 Y_RNA.222-201ENST00000364264 102 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 SNORD42.2-201ENST00000365570 69 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 Y_RNA.395-201ENST00000383945 109 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 SNORA72.4-201ENST00000384174 132 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 RNA5SP95-201ENST00000410319 137 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 AC092628.1-201ENST00000436250 252 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 U8.20-201ENST00000459445 131 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 AC008507.4-201ENST00000585464 127 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 LARP7P1-201ENST00000605576 316 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 RNU6-94P-201ENST00000607728 107 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 AL138825.1-201ENST00000618587 192 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 AC008133.2-201ENST00000624540 351 ntBASIC0.62□□□□□ -2.31
SMARCB1Q12824 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SMARCB1Q12824 Y_RNA.105-201ENST00000363182 111 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 RNA5SP48-201ENST00000363969 126 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 RNU4-50P-201ENST00000364361 141 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 RNU6-21P-201ENST00000384710 107 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 MIR1302-11-201ENST00000408051 138 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 MIR1302-9-201ENST00000408365 138 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 MIR1302-10-201ENST00000408734 138 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.61□□□□□ -2.31
SMARCB1Q12824 MTND4P19-201ENST00000446659 478 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 HSPE1P25-201ENST00000455484 251 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 SNORD11-201ENST00000459124 84 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 RNU6-1132P-201ENST00000459214 107 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 RNU6-397P-201ENST00000516226 104 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 AC036111.3-201ENST00000526389 112 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 MIR4300-201ENST00000581016 96 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.61□□□□□ -2.31
SMARCB1Q12824 MIR1302-2-201ENST00000607096 138 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.61□□□□□ -2.31
SMARCB1Q12824 MIR6516-201ENST00000630554 81 ntBASIC0.61□□□□□ -2.31
SMARCB1Q12824 SNORD14E-201ENST00000364009 85 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 Y_RNA.394-201ENST00000383942 103 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 Y_RNA.540-201ENST00000384638 111 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 MIR15B-201ENST00000385045 98 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 SNORA36B-201ENST00000410438 131 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 PMCHL1-202ENST00000423102 261 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 POLR2KP2-201ENST00000438155 177 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 U8.19-201ENST00000459095 133 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 RNU6-437P-201ENST00000459408 95 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 RNU6-191P-201ENST00000516295 94 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 RPL23AP91-201ENST00000569211 455 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.6□□□□□ -2.31
SMARCB1Q12824 RAC1P9-201ENST00000604990 392 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 JPX_2.1-201ENST00000614161 69 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 MIR4251-201ENST00000635819 61 ntBASIC0.6□□□□□ -2.31
SMARCB1Q12824 MTND4P29-201ENST00000503122 1372 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 SNORD113-8-201ENST00000363497 74 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 RNU6-674P-201ENST00000363831 107 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 RNU6-450P-201ENST00000364654 107 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 Y_RNA.509-201ENST00000384506 99 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 RNU6-121P-201ENST00000410525 99 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms