Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
ROM1Q03395 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ROM1Q03395 MIR21-201ENST00000362134 72 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 Y_RNA.37-201ENST00000362606 108 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 RNU6-1168P-201ENST00000390831 104 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 AC008267.6-201ENST00000441664 139 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 RNU6-1333P-201ENST00000516162 93 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 RNA5SP320-201ENST00000516263 124 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 RNU6-313P-201ENST00000516317 112 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 Y_RNA.692-201ENST00000516627 105 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 RNU6-1149P-201ENST00000516810 97 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
ROM1Q03395 MIR4778-201ENST00000577635 80 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 MIR5197-201ENST00000583721 112 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 AL137847.3-201ENST00000611521 109 ntBASIC2.13□□□□□ -2.07
ROM1Q03395 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ROM1Q03395 MIR208A-201ENST00000362287 71 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 RNU6-235P-201ENST00000362644 107 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 Y_RNA.127-201ENST00000363386 109 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 RNU6-309P-201ENST00000364573 106 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 SNORD116-14-201ENST00000383894 92 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 SNORD116-17-201ENST00000383929 92 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 SNORD116-15-201ENST00000384445 92 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 SNORD116-19-201ENST00000384729 92 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 AL603914.1-201ENST00000401964 204 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 AL359511.1-201ENST00000402970 211 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 Z92545.1-201ENST00000411782 234 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 AC015922.2-201ENST00000435593 184 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 PGBD4P5-201ENST00000445958 426 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 SNORD36C-201ENST00000516733 66 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 SNORA70.24-201ENST00000517233 118 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 GTF3AP2-201ENST00000557014 266 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 Y_RNA.757-201ENST00000578934 114 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 AC078899.2-201ENST00000595282 212 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 AL513423.1-201ENST00000621695 132 ntBASIC2.12□□□□□ -2.07
ROM1Q03395 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ROM1Q03395 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ROM1Q03395 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ROM1Q03395 SNORD114-30-201ENST00000364448 72 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 RNU6-1189P-201ENST00000383958 107 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 Y_RNA.410-201ENST00000383992 113 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 RNU6-80P-201ENST00000384195 107 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 MIR516B2-201ENST00000385190 85 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 RNU2-52P-201ENST00000410680 190 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 RNU6-938P-201ENST00000411285 103 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 RNU4-57P-201ENST00000515980 135 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 SNORD3E-202ENST00000627253 216 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 MIR1291-201ENST00000627649 87 ntBASIC2.11□□□□□ -2.07
ROM1Q03395 Y_RNA.525-201ENST00000384570 113 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 MIR144-201ENST00000384886 86 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 MIR128-1-201ENST00000384921 82 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 MIR660-201ENST00000385235 97 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.1□□□□□ -2.07
ROM1Q03395 RNU7-107P-201ENST00000459121 61 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 RNA5SP236-201ENST00000516169 116 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 SCARNA15-202ENST00000516881 127 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 MIR3121-201ENST00000579680 77 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 AL022345.2-201ENST00000606307 135 ntBASIC2.1□□□□□ -2.07
ROM1Q03395 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.1□□□□□ -2.07
ROM1Q03395 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ROM1Q03395 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ROM1Q03395 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
ROM1Q03395 Y_RNA.114-201ENST00000363265 113 ntBASIC2.09□□□□□ -2.07
ROM1Q03395 SNORA48.2-201ENST00000390926 124 ntBASIC2.09□□□□□ -2.07
ROM1Q03395 AL513328.1-201ENST00000446460 224 ntBASIC2.09□□□□□ -2.07
ROM1Q03395 Y_RNA.651-201ENST00000459380 103 ntBASIC2.09□□□□□ -2.07
ROM1Q03395 AP003484.1-201ENST00000530974 250 ntBASIC2.09□□□□□ -2.07
ROM1Q03395 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.08
ROM1Q03395 AC062016.1-201ENST00000355719 319 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 SNORA2.2-201ENST00000365473 135 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 RNU6-203P-201ENST00000384038 104 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 MIR452-201ENST00000385020 85 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 RNU6-360P-201ENST00000390944 104 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 MTATP6P21-201ENST00000440681 189 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.08□□□□□ -2.08
ROM1Q03395 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.08□□□□□ -2.08
ROM1Q03395 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.08□□□□□ -2.08
ROM1Q03395 AL033523.1-201ENST00000605153 153 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 AL442644.1-201ENST00000454390 3105 ntBASIC2.08□□□□□ -2.08
ROM1Q03395 Y_RNA.280-201ENST00000364765 112 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 AL158147.1-201ENST00000443970 75 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 AC087499.4-201ENST00000448505 178 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 AC026436.1-201ENST00000510537 270 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 RNU6-830P-201ENST00000516353 107 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 SNORA31.11-201ENST00000516528 139 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 RNU7-181P-201ENST00000517234 74 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 AC103810.6-201ENST00000606708 136 ntBASIC2.07□□□□□ -2.08
ROM1Q03395 Y_RNA.440-201ENST00000384120 114 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 MIR491-201ENST00000384877 84 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 MIR526A1-201ENST00000384897 85 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 AC011753.1-201ENST00000451001 220 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 RNU6-659P-201ENST00000516454 104 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 SNORA18.7-201ENST00000516910 131 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 MIR4319-201ENST00000577285 85 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 MIR5007-201ENST00000583098 95 ntBASIC2.06□□□□□ -2.08
ROM1Q03395 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms