Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.44□□□□□ -2.34
CCNA1P78396 RPL23AP54-201ENST00000495129 419 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 SNORA62.5-201ENST00000516634 120 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 AC011195.1-201ENST00000578177 177 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 MIR3145-201ENST00000580727 82 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 MIR548AR-201ENST00000582191 57 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 AC092794.1-201ENST00000612734 582 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 RNU6-490P-201ENST00000362985 107 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 RNA5SP257-201ENST00000363023 116 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 Y_RNA.310-201ENST00000365063 113 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 RNU6-1040P-201ENST00000383974 107 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 SNORD116-29-201ENST00000384516 83 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 RNY4P36-201ENST00000391116 96 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 RNU2-70P-201ENST00000410718 179 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 Y_RNA.619-201ENST00000410951 90 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 AC244098.3-201ENST00000424803 96 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 AC091951.2-201ENST00000500762 203 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 RNU11-2P-201ENST00000516898 142 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 RNU7-116P-201ENST00000516940 62 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 MIR4300-201ENST00000581016 96 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 VN1R91P-201ENST00000594377 169 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 MIR4272-201ENST00000635924 64 ntBASIC0.43□□□□□ -2.34
CCNA1P78396 SNORD113.3-201ENST00000364630 78 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 RNU6-442P-201ENST00000383968 104 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 Y_RNA.456-201ENST00000384232 111 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 MIR1827-201ENST00000408549 66 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 RNA5SP222-201ENST00000411039 105 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 AF228730.4-201ENST00000421457 183 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 NDUFA4P2-201ENST00000489989 244 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.42□□□□□ -2.34
CCNA1P78396 AC127455.1-201ENST00000565496 145 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 MIR4423-201ENST00000580922 80 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 AP003357.1-201ENST00000604497 148 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 AL355073.2-201ENST00000612106 557 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 MIR548AY-201ENST00000617669 107 ntBASIC0.42□□□□□ -2.34
CCNA1P78396 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
CCNA1P78396 SNORD81.1-201ENST00000363064 77 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 RNU6-1209P-201ENST00000363655 107 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 RNU6-613P-201ENST00000410412 108 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 AC098614.3-201ENST00000438957 440 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.41□□□□□ -2.34
CCNA1P78396 RNU4-57P-201ENST00000515980 135 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 RNU7-115P-201ENST00000516433 55 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 AC015726.2-201ENST00000620112 122 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 MIR1302-1-201ENST00000637932 143 ntBASIC0.41□□□□□ -2.34
CCNA1P78396 SNORA36.2-201ENST00000384004 127 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 SNORA51.10-201ENST00000384418 136 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 SNORD105-201ENST00000386910 85 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 MTCO2P33-201ENST00000402100 465 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 MIR1278-201ENST00000408753 81 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 RNU4-30P-201ENST00000410245 143 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 MTND1P14-201ENST00000427400 950 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.4□□□□□ -2.35
CCNA1P78396 SNRPGP14-201ENST00000435400 219 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 HMGN1P10-201ENST00000474557 553 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 RNU6-277P-201ENST00000516272 106 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 MIR2115-201ENST00000516657 100 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 RNU7-110P-201ENST00000516891 62 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 RNU7-181P-201ENST00000517234 74 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 MIR5188-201ENST00000583467 113 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 AC087685.1-201ENST00000587507 141 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 Pinc.1-201ENST00000616452 154 ntBASIC0.4□□□□□ -2.35
CCNA1P78396 RNU6-1048P-201ENST00000364054 107 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 RNU6-268P-201ENST00000364174 107 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 U8.7-201ENST00000364940 136 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 Y_RNA.387-201ENST00000383918 102 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 Y_RNA.428-201ENST00000384078 102 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 Y_RNA.463-201ENST00000384271 102 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 SNORD72-201ENST00000390994 80 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 U8.17-201ENST00000391292 132 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 Y_RNA.681-201ENST00000516445 113 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 AL355375.2-201ENST00000574825 175 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 MIR548AO-201ENST00000579992 96 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 AC025253.1-201ENST00000613623 543 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 AC084781.2-201ENST00000615568 161 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
CCNA1P78396 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
CCNA1P78396 Y_RNA.168-201ENST00000363740 102 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 Y_RNA.370-201ENST00000365589 108 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 Y_RNA.496-201ENST00000384444 101 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 AC024067.1-201ENST00000426199 223 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.38□□□□□ -2.35
CCNA1P78396 snoU13.21-201ENST00000459368 105 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 SNORA20.3-201ENST00000516880 132 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 Y_RNA.718-201ENST00000517110 102 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 SNORD116.3-201ENST00000517176 78 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.38□□□□□ -2.35
CCNA1P78396 AC008507.4-201ENST00000585464 127 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 Y_RNA.772-201ENST00000606692 102 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 AC011373.1-201ENST00000607270 237 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 AC104985.2-201ENST00000620598 500 ntBASIC0.38□□□□□ -2.35
CCNA1P78396 MIR1-1-201ENST00000362147 71 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms