Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RNU6-679P-201ENST00000391003 106 ntBASIC3.47□□□□□ -1.85
USP46P62068 U8.16-201ENST00000391279 133 ntBASIC3.47□□□□□ -1.85
USP46P62068 RN7SKP192-201ENST00000411291 327 ntBASIC3.47□□□□□ -1.85
USP46P62068 HSPE1P9-201ENST00000440046 311 ntBASIC3.47□□□□□ -1.85
USP46P62068 RNU6-1258P-201ENST00000516911 111 ntBASIC3.47□□□□□ -1.85
USP46P62068 U4atac.1-201ENST00000618345 95 ntBASIC3.47□□□□□ -1.85
USP46P62068 MIR8057-201ENST00000620957 69 ntBASIC3.47□□□□□ -1.85
USP46P62068 MIR3202-2-201ENST00000635980 79 ntBASIC3.47□□□□□ -1.85
USP46P62068 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP46P62068 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP46P62068 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
USP46P62068 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USP46P62068 MIR483-201ENST00000385070 76 ntBASIC3.46□□□□□ -1.86
USP46P62068 MIR516B2-201ENST00000385190 85 ntBASIC3.46□□□□□ -1.86
USP46P62068 RNU6-972P-201ENST00000391208 107 ntBASIC3.46□□□□□ -1.86
USP46P62068 MIR1255A-201ENST00000408338 113 ntBASIC3.46□□□□□ -1.86
USP46P62068 AC104332.2-201ENST00000429959 156 ntBASIC3.46□□□□□ -1.86
USP46P62068 AL353813.1-201ENST00000440700 253 ntBASIC3.46□□□□□ -1.86
USP46P62068 RNA5SP33-201ENST00000516687 98 ntBASIC3.46□□□□□ -1.86
USP46P62068 MIR2276-201ENST00000516886 89 ntBASIC3.46□□□□□ -1.86
USP46P62068 RNU6-958P-201ENST00000516995 106 ntBASIC3.46□□□□□ -1.86
USP46P62068 MIR3152-201ENST00000579801 74 ntBASIC3.46□□□□□ -1.86
USP46P62068 MIR4777-201ENST00000583710 86 ntBASIC3.46□□□□□ -1.86
USP46P62068 AC103810.6-201ENST00000606708 136 ntBASIC3.46□□□□□ -1.86
USP46P62068 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.46□□□□□ -1.86
USP46P62068 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP46P62068 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP46P62068 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
USP46P62068 RNA5SP374-201ENST00000362939 125 ntBASIC3.45□□□□□ -1.86
USP46P62068 RNU6-1019P-201ENST00000364424 107 ntBASIC3.45□□□□□ -1.86
USP46P62068 AL034345.1-201ENST00000407768 123 ntBASIC3.45□□□□□ -1.86
USP46P62068 RNU7-67P-201ENST00000459003 62 ntBASIC3.45□□□□□ -1.86
USP46P62068 RNU7-12P-201ENST00000516030 62 ntBASIC3.45□□□□□ -1.86
USP46P62068 MIR5094-201ENST00000578766 85 ntBASIC3.45□□□□□ -1.86
USP46P62068 MIR548AE2-201ENST00000583456 67 ntBASIC3.45□□□□□ -1.86
USP46P62068 AC005786.1-201ENST00000588553 154 ntBASIC3.45□□□□□ -1.86
USP46P62068 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
USP46P62068 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.45□□□□□ -1.86
USP46P62068 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP46P62068 MAPK10-362ENST00000641864 4484 ntBASIC3.45□□□□□ -1.86
USP46P62068 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.44□□□□□ -1.86
USP46P62068 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.44□□□□□ -1.86
USP46P62068 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
USP46P62068 MIR148B-201ENST00000362252 99 ntBASIC3.44□□□□□ -1.86
USP46P62068 SNORA22.1-201ENST00000362701 134 ntBASIC3.44□□□□□ -1.86
USP46P62068 Y_RNA.96-201ENST00000363092 109 ntBASIC3.44□□□□□ -1.86
USP46P62068 Y_RNA.190-201ENST00000363964 101 ntBASIC3.44□□□□□ -1.86
USP46P62068 SNORA1.2-201ENST00000365189 134 ntBASIC3.44□□□□□ -1.86
USP46P62068 RNU6-1276P-201ENST00000365372 104 ntBASIC3.44□□□□□ -1.86
USP46P62068 Y_RNA.370-201ENST00000365589 108 ntBASIC3.44□□□□□ -1.86
USP46P62068 Y_RNA.470-201ENST00000384307 117 ntBASIC3.44□□□□□ -1.86
USP46P62068 RNU6-1319P-201ENST00000390855 104 ntBASIC3.44□□□□□ -1.86
USP46P62068 RNU6-747P-201ENST00000390928 104 ntBASIC3.44□□□□□ -1.86
USP46P62068 RNU6-241P-201ENST00000391148 104 ntBASIC3.44□□□□□ -1.86
USP46P62068 AL451046.2-201ENST00000403074 277 ntBASIC3.44□□□□□ -1.86
USP46P62068 RNU6-177P-201ENST00000411257 104 ntBASIC3.44□□□□□ -1.86
USP46P62068 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.44□□□□□ -1.86
USP46P62068 RNA5SP168-201ENST00000516642 112 ntBASIC3.44□□□□□ -1.86
USP46P62068 RPPH1-2P-201ENST00000516688 293 ntBASIC3.44□□□□□ -1.86
USP46P62068 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.44□□□□□ -1.86
USP46P62068 AC022202.1-201ENST00000613515 211 ntBASIC3.44□□□□□ -1.86
USP46P62068 AL512310.12-203ENST00000640543 90 ntBASIC3.44□□□□□ -1.86
USP46P62068 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP46P62068 RNU6-833P-201ENST00000363486 107 ntBASIC3.43□□□□□ -1.86
USP46P62068 SNORA70.7-201ENST00000384159 133 ntBASIC3.43□□□□□ -1.86
USP46P62068 SNORA48.2-201ENST00000390926 124 ntBASIC3.43□□□□□ -1.86
USP46P62068 RNU6-402P-201ENST00000410678 103 ntBASIC3.43□□□□□ -1.86
USP46P62068 RNU6-521P-201ENST00000516663 105 ntBASIC3.43□□□□□ -1.86
USP46P62068 MIR5004-201ENST00000579078 107 ntBASIC3.43□□□□□ -1.86
USP46P62068 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.43□□□□□ -1.86
USP46P62068 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP46P62068 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
USP46P62068 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.42□□□□□ -1.86
USP46P62068 RNU1-58P-201ENST00000362413 163 ntBASIC3.42□□□□□ -1.86
USP46P62068 Y_RNA.95-201ENST00000363079 95 ntBASIC3.42□□□□□ -1.86
USP46P62068 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP46P62068 RNU6-1201P-201ENST00000384227 107 ntBASIC3.42□□□□□ -1.86
USP46P62068 Y_RNA.467-201ENST00000384297 102 ntBASIC3.42□□□□□ -1.86
USP46P62068 RNA5SP229-201ENST00000410809 99 ntBASIC3.42□□□□□ -1.86
USP46P62068 RNU7-34P-201ENST00000459394 64 ntBASIC3.42□□□□□ -1.86
USP46P62068 uc_338.1-201ENST00000612113 180 ntBASIC3.42□□□□□ -1.86
USP46P62068 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
USP46P62068 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.41□□□□□ -1.86
USP46P62068 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP46P62068 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP46P62068 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP46P62068 SNORA32-201ENST00000384072 121 ntBASIC3.41□□□□□ -1.86
USP46P62068 SNORD116-22-201ENST00000384430 92 ntBASIC3.41□□□□□ -1.86
USP46P62068 MIR128-1-201ENST00000384921 82 ntBASIC3.41□□□□□ -1.86
USP46P62068 RNU7-53P-201ENST00000516705 60 ntBASIC3.41□□□□□ -1.86
USP46P62068 Y_RNA.705-201ENST00000516862 110 ntBASIC3.41□□□□□ -1.86
USP46P62068 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.41□□□□□ -1.86
USP46P62068 AC007336.1-201ENST00000576365 3828 ntBASIC3.41□□□□□ -1.86
USP46P62068 MIR2682-201ENST00000580305 110 ntBASIC3.41□□□□□ -1.86
USP46P62068 AC025521.1-201ENST00000621624 286 ntBASIC3.41□□□□□ -1.86
USP46P62068 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.41□□□□□ -1.86
USP46P62068 AC017071.1-201ENST00000564407 2204 ntBASIC3.41□□□□□ -1.86
USP46P62068 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP46P62068 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
USP46P62068 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms