Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.27-201ENST00000362540 103 ntBASIC0.38□□□□□ -2.35
VSX2P58304 RNU6-1048P-201ENST00000364054 107 ntBASIC0.38□□□□□ -2.35
VSX2P58304 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
VSX2P58304 SNORD72-201ENST00000390994 80 ntBASIC0.38□□□□□ -2.35
VSX2P58304 AL603910.2-201ENST00000407268 136 ntBASIC0.38□□□□□ -2.35
VSX2P58304 MTCO2P12-201ENST00000427426 682 ntBASIC0.38□□□□□ -2.35
VSX2P58304 RPL23AP54-201ENST00000495129 419 ntBASIC0.38□□□□□ -2.35
VSX2P58304 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.38□□□□□ -2.35
VSX2P58304 RNU6-559P-201ENST00000516151 98 ntBASIC0.38□□□□□ -2.35
VSX2P58304 RNU6-830P-201ENST00000516353 107 ntBASIC0.38□□□□□ -2.35
VSX2P58304 RNU7-115P-201ENST00000516433 55 ntBASIC0.38□□□□□ -2.35
VSX2P58304 RNU2-14P-201ENST00000411053 191 ntBASIC0.37□□□□□ -2.35
VSX2P58304 AC005042.3-201ENST00000453230 174 ntBASIC0.37□□□□□ -2.35
VSX2P58304 Y_RNA.653-201ENST00000459091 95 ntBASIC0.37□□□□□ -2.35
VSX2P58304 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.37□□□□□ -2.35
VSX2P58304 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
VSX2P58304 Y_RNA.714-201ENST00000517065 90 ntBASIC0.37□□□□□ -2.35
VSX2P58304 AL355073.2-201ENST00000612106 557 ntBASIC0.37□□□□□ -2.35
VSX2P58304 AL136317.1-201ENST00000612653 226 ntBASIC0.37□□□□□ -2.35
VSX2P58304 MIR924-201ENST00000638017 53 ntBASIC0.37□□□□□ -2.35
VSX2P58304 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.36□□□□□ -2.35
VSX2P58304 Y_RNA.168-201ENST00000363740 102 ntBASIC0.36□□□□□ -2.35
VSX2P58304 Y_RNA.248-201ENST00000364501 109 ntBASIC0.36□□□□□ -2.35
VSX2P58304 Y_RNA.456-201ENST00000384232 111 ntBASIC0.36□□□□□ -2.35
VSX2P58304 SNORD38C-201ENST00000384381 69 ntBASIC0.36□□□□□ -2.35
VSX2P58304 SNORD116-29-201ENST00000384516 83 ntBASIC0.36□□□□□ -2.35
VSX2P58304 RNU6-710P-201ENST00000410424 105 ntBASIC0.36□□□□□ -2.35
VSX2P58304 AC090844.1-201ENST00000422019 156 ntBASIC0.36□□□□□ -2.35
VSX2P58304 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
VSX2P58304 U8.19-201ENST00000459095 133 ntBASIC0.36□□□□□ -2.35
VSX2P58304 RNU6-911P-201ENST00000516523 104 ntBASIC0.36□□□□□ -2.35
VSX2P58304 RNU7-116P-201ENST00000516940 62 ntBASIC0.36□□□□□ -2.35
VSX2P58304 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.36□□□□□ -2.35
VSX2P58304 AC006600.1-201ENST00000572529 153 ntBASIC0.36□□□□□ -2.35
VSX2P58304 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
VSX2P58304 MIR4791-201ENST00000607666 84 ntBASIC0.36□□□□□ -2.35
VSX2P58304 AC092794.1-201ENST00000612734 582 ntBASIC0.36□□□□□ -2.35
VSX2P58304 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
VSX2P58304 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.36□□□□□ -2.35
VSX2P58304 RNU6-490P-201ENST00000362985 107 ntBASIC0.35□□□□□ -2.35
VSX2P58304 RNU4-50P-201ENST00000364361 141 ntBASIC0.35□□□□□ -2.35
VSX2P58304 Y_RNA.813-201ENST00000364639 102 ntBASIC0.35□□□□□ -2.35
VSX2P58304 RNU6-580P-201ENST00000365159 107 ntBASIC0.35□□□□□ -2.35
VSX2P58304 Y_RNA.331-201ENST00000365267 102 ntBASIC0.35□□□□□ -2.35
VSX2P58304 RNU6-396P-201ENST00000365369 105 ntBASIC0.35□□□□□ -2.35
VSX2P58304 RNU6-442P-201ENST00000383968 104 ntBASIC0.35□□□□□ -2.35
VSX2P58304 Y_RNA.494-201ENST00000384432 111 ntBASIC0.35□□□□□ -2.35
VSX2P58304 RNU6-125P-201ENST00000384505 107 ntBASIC0.35□□□□□ -2.35
VSX2P58304 MIR628-201ENST00000385229 95 ntBASIC0.35□□□□□ -2.35
VSX2P58304 RNU6-205P-201ENST00000390858 107 ntBASIC0.35□□□□□ -2.35
VSX2P58304 MTCO2P33-201ENST00000402100 465 ntBASIC0.35□□□□□ -2.35
VSX2P58304 RNU4-30P-201ENST00000410245 143 ntBASIC0.35□□□□□ -2.35
VSX2P58304 SNORD83.1-201ENST00000411362 77 ntBASIC0.35□□□□□ -2.35
VSX2P58304 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.35□□□□□ -2.35
VSX2P58304 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
VSX2P58304 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
VSX2P58304 MIR2115-201ENST00000516657 100 ntBASIC0.35□□□□□ -2.35
VSX2P58304 AC127455.1-201ENST00000565496 145 ntBASIC0.35□□□□□ -2.35
VSX2P58304 AC008507.4-201ENST00000585464 127 ntBASIC0.35□□□□□ -2.35
VSX2P58304 AC113139.1-201ENST00000605049 239 ntBASIC0.35□□□□□ -2.35
VSX2P58304 AC025253.1-201ENST00000613623 543 ntBASIC0.35□□□□□ -2.35
VSX2P58304 AC084781.2-201ENST00000615568 161 ntBASIC0.35□□□□□ -2.35
VSX2P58304 AC104985.2-201ENST00000620598 500 ntBASIC0.35□□□□□ -2.35
VSX2P58304 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
VSX2P58304 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
VSX2P58304 Y_RNA.80-201ENST00000362996 102 ntBASIC0.34□□□□□ -2.36
VSX2P58304 Y_RNA.370-201ENST00000365589 108 ntBASIC0.34□□□□□ -2.36
VSX2P58304 Y_RNA.458-201ENST00000384240 102 ntBASIC0.34□□□□□ -2.36
VSX2P58304 Y_RNA.485-201ENST00000384395 102 ntBASIC0.34□□□□□ -2.36
VSX2P58304 SNORA51.10-201ENST00000384418 136 ntBASIC0.34□□□□□ -2.36
VSX2P58304 Y_RNA.496-201ENST00000384444 101 ntBASIC0.34□□□□□ -2.36
VSX2P58304 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
VSX2P58304 RNU2-13P-201ENST00000515909 113 ntBASIC0.34□□□□□ -2.36
VSX2P58304 RPL23AP91-201ENST00000569211 455 ntBASIC0.34□□□□□ -2.36
VSX2P58304 VN1R91P-201ENST00000594377 169 ntBASIC0.34□□□□□ -2.36
VSX2P58304 LARP7P1-201ENST00000605576 316 ntBASIC0.34□□□□□ -2.36
VSX2P58304 JPX_2.1-201ENST00000614161 69 ntBASIC0.34□□□□□ -2.36
VSX2P58304 AC010205.1-201ENST00000616668 449 ntBASIC0.34□□□□□ -2.36
VSX2P58304 MIR548AY-201ENST00000617669 107 ntBASIC0.34□□□□□ -2.36
VSX2P58304 MIR4272-201ENST00000635924 64 ntBASIC0.34□□□□□ -2.36
VSX2P58304 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
VSX2P58304 RNU6-801P-201ENST00000364087 105 ntBASIC0.33□□□□□ -2.36
VSX2P58304 RNU6-934P-201ENST00000365154 107 ntBASIC0.33□□□□□ -2.36
VSX2P58304 Y_RNA.463-201ENST00000384271 102 ntBASIC0.33□□□□□ -2.36
VSX2P58304 RNU6-937P-201ENST00000384325 106 ntBASIC0.33□□□□□ -2.36
VSX2P58304 MTND1P14-201ENST00000427400 950 ntBASIC0.33□□□□□ -2.36
VSX2P58304 RNU6-277P-201ENST00000516272 106 ntBASIC0.33□□□□□ -2.36
VSX2P58304 MIR5188-201ENST00000583467 113 ntBASIC0.33□□□□□ -2.36
VSX2P58304 AC020891.4-201ENST00000605745 93 ntBASIC0.33□□□□□ -2.36
VSX2P58304 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
VSX2P58304 Y_RNA.258-201ENST00000364613 105 ntBASIC0.32□□□□□ -2.36
VSX2P58304 Y_RNA.537-201ENST00000384626 109 ntBASIC0.32□□□□□ -2.36
VSX2P58304 MIR573-201ENST00000384964 99 ntBASIC0.32□□□□□ -2.36
VSX2P58304 MIR520H-201ENST00000385126 88 ntBASIC0.32□□□□□ -2.36
VSX2P58304 SNORA36B-201ENST00000410438 131 ntBASIC0.32□□□□□ -2.36
VSX2P58304 AL358176.2-201ENST00000425769 204 ntBASIC0.32□□□□□ -2.36
VSX2P58304 AC099799.1-201ENST00000439809 192 ntBASIC0.32□□□□□ -2.36
VSX2P58304 RNU7-141P-201ENST00000459304 62 ntBASIC0.32□□□□□ -2.36
VSX2P58304 RNU7-110P-201ENST00000516891 62 ntBASIC0.32□□□□□ -2.36
VSX2P58304 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms