Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-457P-201ENST00000363999 107 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 Y_RNA.242-201ENST00000364473 110 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 Y_RNA.262-201ENST00000364641 102 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 Y_RNA.269-201ENST00000364685 89 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 SNORD1A-201ENST00000364968 72 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 SNORD50B-201ENST00000364995 70 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN20P56880 AC093850.1-201ENST00000454121 251 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.44□□□□□ -2.18
CLDN20P56880 AC079140.2-201ENST00000506193 142 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 RNU6-237P-201ENST00000515985 71 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 RNU4-71P-201ENST00000516258 113 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 AP000942.4-201ENST00000604811 241 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.44□□□□□ -2.18
CLDN20P56880 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN20P56880 Y_RNA.24-201ENST00000362508 103 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 Y_RNA.336-201ENST00000365307 109 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN20P56880 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN20P56880 COX6CP14-201ENST00000469580 174 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 RNU6-1271P-201ENST00000517049 105 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 RNU6-111P-201ENST00000517179 105 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 WWP1P1-201ENST00000466609 2769 ntBASIC1.43□□□□□ -2.18
CLDN20P56880 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CLDN20P56880 RNU6-653P-201ENST00000363074 106 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 Y_RNA.140-201ENST00000363474 103 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 SNORD14E-201ENST00000364009 85 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 RNY1-201ENST00000364228 113 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 RNY4P28-201ENST00000365281 93 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.42□□□□□ -2.18
CLDN20P56880 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 AC008507.4-201ENST00000585464 127 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 uc_338.4-201ENST00000616635 176 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 AC106754.2-201ENST00000623006 233 ntBASIC1.42□□□□□ -2.18
CLDN20P56880 Y_RNA.229-201ENST00000364347 113 ntBASIC1.41□□□□□ -2.18
CLDN20P56880 MIR452-201ENST00000385020 85 ntBASIC1.41□□□□□ -2.18
CLDN20P56880 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
CLDN20P56880 MIR802-201ENST00000390235 94 ntBASIC1.41□□□□□ -2.18
CLDN20P56880 AC108667.1-201ENST00000428618 249 ntBASIC1.41□□□□□ -2.18
CLDN20P56880 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
CLDN20P56880 AC245517.4-201ENST00000448601 281 ntBASIC1.41□□□□□ -2.18
CLDN20P56880 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN20P56880 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
CLDN20P56880 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CLDN20P56880 SNORA2.2-201ENST00000365473 135 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 RNU4-17P-201ENST00000365598 141 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 RNU6-442P-201ENST00000383968 104 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 RNU6-1065P-201ENST00000384513 106 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 Y_RNA.572-201ENST00000384757 98 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 Y_RNA.626-201ENST00000411288 95 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 AC092991.1-201ENST00000477176 376 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 RNA5SP445-201ENST00000515889 115 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN20P56880 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 AL049861.1-201ENST00000603130 150 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 AL365434.2-201ENST00000607979 234 ntBASIC1.4□□□□□ -2.19
CLDN20P56880 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CLDN20P56880 RNU6-1138P-201ENST00000365359 106 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 Y_RNA.476-201ENST00000384347 108 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 MIR616-201ENST00000385293 97 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 MIR1298-201ENST00000408783 112 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 SNX2P2-201ENST00000424553 323 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 SNORD77.4-201ENST00000516158 81 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 RNU7-149P-201ENST00000516739 59 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 AC090049.2-201ENST00000550377 109 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 MIR3937-201ENST00000580135 106 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 AL391903.3-201ENST00000612158 163 ntBASIC1.39□□□□□ -2.19
CLDN20P56880 RNU6-379P-201ENST00000363813 104 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 snoU2_19.4-201ENST00000364329 80 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RNU6-60P-201ENST00000364792 103 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RNY3P5-201ENST00000384127 102 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 MIR526A1-201ENST00000384897 85 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RNU6-381P-201ENST00000391259 108 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN20P56880 AC245047.8-201ENST00000456455 284 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RNU6-322P-201ENST00000516010 103 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RN7SKP164-201ENST00000516138 266 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RNU6-917P-201ENST00000516294 104 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 RNU6-970P-201ENST00000516312 107 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 MIR4662B-201ENST00000579498 81 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 AP000942.3-201ENST00000603702 160 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 AL513534.2-201ENST00000603836 250 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 AC009779.6-201ENST00000603972 165 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.38□□□□□ -2.19
CLDN20P56880 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CLDN20P56880 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLDN20P56880 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms