Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNU6-705P-201ENST00000410601 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-1100P-201ENST00000410691 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-860P-201ENST00000410860 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-1217P-201ENST00000411276 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-785P-201ENST00000411324 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 AC107297.1-201ENST00000459991 176 ntBASIC0□□□□□ -2.41
CLDN18P56856 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
CLDN18P56856 U6.90-201ENST00000614007 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 U6.70-201ENST00000620287 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0□□□□□ -2.41
CLDN18P56856 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 RNA5SP117-201ENST00000365294 118 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 RNU6-815P-201ENST00000384080 113 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 MTND1P29-201ENST00000448112 647 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 AC069113.3-201ENST00000521019 150 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 AC078938.1-201ENST00000620993 318 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 AC022079.1-201ENST00000621546 602 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
CLDN18P56856 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CLDN18P56856 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 MIR548K-201ENST00000408406 116 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 MCFD2P1-201ENST00000417812 300 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 RNU6-264P-201ENST00000517134 104 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 EIF1P4-201ENST00000572664 335 ntBASIC-0.02□□□□□ -2.41
CLDN18P56856 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 SNORD78.2-201ENST00000391076 69 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 SNORD115-47-201ENST00000391226 86 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 SNORD100-201ENST00000408573 76 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.03□□□□□ -2.41
CLDN18P56856 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.03□□□□□ -2.41
CLDN18P56856 SNORA18.4-201ENST00000516440 124 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 AC024405.2-202ENST00000532731 184 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.03□□□□□ -2.41
CLDN18P56856 MIR2681-201ENST00000581814 105 ntBASIC-0.03□□□□□ -2.41
CLDN18P56856 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 SNORA42.1-201ENST00000363515 137 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 SNORD118-201ENST00000363593 134 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 SNORA63C-201ENST00000364578 129 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 SNORA8.2-201ENST00000384372 139 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 SNORA75.4-201ENST00000391278 119 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.04□□□□□ -2.42
CLDN18P56856 SNRPGP14-201ENST00000435400 219 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 RPL30P15-201ENST00000457129 321 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 RNU7-67P-201ENST00000459003 62 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 RNU6-863P-201ENST00000515989 104 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 AC144568.1-201ENST00000520139 137 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 AC011476.5-201ENST00000615594 130 ntBASIC-0.04□□□□□ -2.42
CLDN18P56856 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AC024067.1-201ENST00000426199 223 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AC236972.2-201ENST00000434979 310 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 RNU7-102P-201ENST00000458948 62 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 snoU13.16-201ENST00000459350 104 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 RNU7-169P-201ENST00000459456 61 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AC112693.2-201ENST00000556538 232 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AC090897.1-201ENST00000580909 226 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 MIR5188-201ENST00000583467 113 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AL355297.3-201ENST00000604082 446 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AC134878.1-201ENST00000619901 243 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AC067863.3-201ENST00000624172 122 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 AC010332.2-201ENST00000613083 1904 ntBASIC-0.05□□□□□ -2.42
CLDN18P56856 RNA5SP214-201ENST00000363378 118 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 SNORA75.6-201ENST00000391318 127 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 MTND1P2-201ENST00000430604 821 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 SEPT7P4-201ENST00000437076 306 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 AC024909.2-201ENST00000553035 286 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 MIR3678-201ENST00000578455 94 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 MIR4659A-201ENST00000580269 81 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 AC008507.4-201ENST00000585464 127 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 AP003357.1-201ENST00000604497 148 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 AC087588.2-201ENST00000617667 426 ntBASIC-0.06□□□□□ -2.42
CLDN18P56856 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 SNORD38B-201ENST00000384690 67 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 MIR1257-201ENST00000408490 117 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 MIR18B-201ENST00000454574 71 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 RPS29P25-201ENST00000481709 171 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 RNU7-4P-201ENST00000516961 62 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 RNU7-156P-201ENST00000517214 74 ntBASIC-0.07□□□□□ -2.42
CLDN18P56856 MIR4305-201ENST00000583252 102 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms