Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNU2-70P-201ENST00000410718 179 ntBASIC2.12□□□□□ -2.07
PER3P56645 AL392103.1-201ENST00000447000 198 ntBASIC2.12□□□□□ -2.07
PER3P56645 MIR4662B-201ENST00000579498 81 ntBASIC2.12□□□□□ -2.07
PER3P56645 AC120024.3-201ENST00000603167 156 ntBASIC2.12□□□□□ -2.07
PER3P56645 SNORA28-201ENST00000606769 126 ntBASIC2.12□□□□□ -2.07
PER3P56645 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
PER3P56645 MTND1P7-201ENST00000632801 297 ntBASIC2.12□□□□□ -2.07
PER3P56645 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PER3P56645 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PER3P56645 AC016717.2-201ENST00000609089 5141 ntBASIC2.11□□□□□ -2.07
PER3P56645 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
PER3P56645 RNY1P11-201ENST00000363759 113 ntBASIC2.11□□□□□ -2.07
PER3P56645 U8.16-201ENST00000391279 133 ntBASIC2.11□□□□□ -2.07
PER3P56645 SNORA79-201ENST00000408376 140 ntBASIC2.11□□□□□ -2.07
PER3P56645 RNU2-7P-201ENST00000410794 178 ntBASIC2.11□□□□□ -2.07
PER3P56645 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.11□□□□□ -2.07
PER3P56645 CALM2P4-201ENST00000430810 426 ntBASIC2.11□□□□□ -2.07
PER3P56645 SNRPGP14-201ENST00000435400 219 ntBASIC2.11□□□□□ -2.07
PER3P56645 AC099513.1-201ENST00000490423 301 ntBASIC2.11□□□□□ -2.07
PER3P56645 SNORD45.4-201ENST00000516629 73 ntBASIC2.11□□□□□ -2.07
PER3P56645 Y_RNA.714-201ENST00000517065 90 ntBASIC2.11□□□□□ -2.07
PER3P56645 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.11□□□□□ -2.07
PER3P56645 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
PER3P56645 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
PER3P56645 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PER3P56645 Y_RNA.215-201ENST00000364204 112 ntBASIC2.1□□□□□ -2.07
PER3P56645 RNU6-597P-201ENST00000365620 102 ntBASIC2.1□□□□□ -2.07
PER3P56645 Y_RNA.393-201ENST00000383936 102 ntBASIC2.1□□□□□ -2.07
PER3P56645 RNU6-424P-201ENST00000384367 105 ntBASIC2.1□□□□□ -2.07
PER3P56645 RNA5SP247-201ENST00000411181 105 ntBASIC2.1□□□□□ -2.07
PER3P56645 CYCSP49-201ENST00000420810 319 ntBASIC2.1□□□□□ -2.07
PER3P56645 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.1□□□□□ -2.07
PER3P56645 snoU13.27-201ENST00000459278 104 ntBASIC2.1□□□□□ -2.07
PER3P56645 AC021506.2-201ENST00000612354 169 ntBASIC2.1□□□□□ -2.07
PER3P56645 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
PER3P56645 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PER3P56645 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNU6-1084P-201ENST00000362498 107 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNU6-1082P-201ENST00000364574 107 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNU4-11P-201ENST00000365287 132 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNU6-1336P-201ENST00000383886 109 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNU6-950P-201ENST00000384651 107 ntBASIC2.09□□□□□ -2.07
PER3P56645 AL034345.1-201ENST00000407768 123 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNU4-61P-201ENST00000411243 107 ntBASIC2.09□□□□□ -2.07
PER3P56645 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
PER3P56645 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.09□□□□□ -2.07
PER3P56645 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
PER3P56645 AC114811.1-201ENST00000507207 168 ntBASIC2.09□□□□□ -2.07
PER3P56645 Y_RNA.666-201ENST00000516187 112 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNA5SP168-201ENST00000516642 112 ntBASIC2.09□□□□□ -2.07
PER3P56645 RNA5SP481-201ENST00000516814 122 ntBASIC2.09□□□□□ -2.07
PER3P56645 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
PER3P56645 MIR21-201ENST00000362134 72 ntBASIC2.08□□□□□ -2.08
PER3P56645 snoU2-30.1-201ENST00000365012 70 ntBASIC2.08□□□□□ -2.08
PER3P56645 SNORD61-201ENST00000384252 73 ntBASIC2.08□□□□□ -2.08
PER3P56645 Y_RNA.521-201ENST00000384560 114 ntBASIC2.08□□□□□ -2.08
PER3P56645 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
PER3P56645 MIR569-201ENST00000385228 96 ntBASIC2.08□□□□□ -2.08
PER3P56645 RNU6-126P-201ENST00000516685 103 ntBASIC2.08□□□□□ -2.08
PER3P56645 RNU6-365P-201ENST00000517113 106 ntBASIC2.08□□□□□ -2.08
PER3P56645 AC007751.1-201ENST00000529260 376 ntBASIC2.08□□□□□ -2.08
PER3P56645 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
PER3P56645 MIR6132-201ENST00000622083 109 ntBASIC2.08□□□□□ -2.08
PER3P56645 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.07□□□□□ -2.08
PER3P56645 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PER3P56645 RNU6-268P-201ENST00000364174 107 ntBASIC2.07□□□□□ -2.08
PER3P56645 Y_RNA.338-201ENST00000365320 114 ntBASIC2.07□□□□□ -2.08
PER3P56645 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
PER3P56645 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
PER3P56645 SNORA26-201ENST00000391286 122 ntBASIC2.07□□□□□ -2.08
PER3P56645 RNU6-588P-201ENST00000410281 105 ntBASIC2.07□□□□□ -2.08
PER3P56645 RNU7-197P-201ENST00000458836 62 ntBASIC2.07□□□□□ -2.08
PER3P56645 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
PER3P56645 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.07□□□□□ -2.08
PER3P56645 MIR4709-201ENST00000577272 72 ntBASIC2.07□□□□□ -2.08
PER3P56645 MIR3646-201ENST00000578301 84 ntBASIC2.07□□□□□ -2.08
PER3P56645 AC006441.5-201ENST00000612680 209 ntBASIC2.07□□□□□ -2.08
PER3P56645 MIR219B-201ENST00000637023 88 ntBASIC2.07□□□□□ -2.08
PER3P56645 MIR6844-201ENST00000637122 62 ntBASIC2.07□□□□□ -2.08
PER3P56645 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PER3P56645 SNORA1-201ENST00000384107 130 ntBASIC2.06□□□□□ -2.08
PER3P56645 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
PER3P56645 RNU7-34P-201ENST00000459394 64 ntBASIC2.06□□□□□ -2.08
PER3P56645 CYCTP-201ENST00000504253 315 ntBASIC2.06□□□□□ -2.08
PER3P56645 RNA5SP272-201ENST00000516095 111 ntBASIC2.06□□□□□ -2.08
PER3P56645 MIR548X2-201ENST00000579776 100 ntBASIC2.06□□□□□ -2.08
PER3P56645 MIR5007-201ENST00000583098 95 ntBASIC2.06□□□□□ -2.08
PER3P56645 AC067747.1-201ENST00000608026 250 ntBASIC2.06□□□□□ -2.08
PER3P56645 AC027279.3-201ENST00000625055 122 ntBASIC2.06□□□□□ -2.08
PER3P56645 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.06□□□□□ -2.08
PER3P56645 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PER3P56645 AL442644.1-201ENST00000454390 3105 ntBASIC2.05□□□□□ -2.08
PER3P56645 RNU6-888P-201ENST00000363010 101 ntBASIC2.05□□□□□ -2.08
PER3P56645 SNORD14E-201ENST00000364009 85 ntBASIC2.05□□□□□ -2.08
PER3P56645 Y_RNA.336-201ENST00000365307 109 ntBASIC2.05□□□□□ -2.08
PER3P56645 SNORD50.2-201ENST00000365465 70 ntBASIC2.05□□□□□ -2.08
PER3P56645 SNORD24-201ENST00000383884 75 ntBASIC2.05□□□□□ -2.08
PER3P56645 RNU6-442P-201ENST00000383968 104 ntBASIC2.05□□□□□ -2.08
PER3P56645 RNU6-163P-201ENST00000384396 106 ntBASIC2.05□□□□□ -2.08
PER3P56645 Y_RNA.488-201ENST00000384403 102 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 306.1 ms