Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Y_RNA.286-201ENST00000364813 102 ntBASIC0.98□□□□□ -2.25
VCPP55072 U8.7-201ENST00000364940 136 ntBASIC0.98□□□□□ -2.25
VCPP55072 Y_RNA.336-201ENST00000365307 109 ntBASIC0.98□□□□□ -2.25
VCPP55072 SNORA63.7-201ENST00000365579 123 ntBASIC0.98□□□□□ -2.25
VCPP55072 RNU6-716P-201ENST00000365621 103 ntBASIC0.98□□□□□ -2.25
VCPP55072 RNU6-474P-201ENST00000384243 107 ntBASIC0.98□□□□□ -2.25
VCPP55072 RNU6-131P-201ENST00000391144 107 ntBASIC0.98□□□□□ -2.25
VCPP55072 MIR936-201ENST00000401264 98 ntBASIC0.98□□□□□ -2.25
VCPP55072 SNRPGP10-201ENST00000432323 225 ntBASIC0.98□□□□□ -2.25
VCPP55072 POLR2KP2-201ENST00000438155 177 ntBASIC0.98□□□□□ -2.25
VCPP55072 AC245047.7-201ENST00000440265 293 ntBASIC0.98□□□□□ -2.25
VCPP55072 AC117454.1-201ENST00000491120 168 ntBASIC0.98□□□□□ -2.25
VCPP55072 AC024405.2-202ENST00000532731 184 ntBASIC0.98□□□□□ -2.25
VCPP55072 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
VCPP55072 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VCPP55072 MTND4P29-201ENST00000503122 1372 ntBASIC0.97□□□□□ -2.25
VCPP55072 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
VCPP55072 snoU2-30.1-201ENST00000365012 70 ntBASIC0.97□□□□□ -2.25
VCPP55072 RNU6-910P-201ENST00000390844 107 ntBASIC0.97□□□□□ -2.25
VCPP55072 RNU6-823P-201ENST00000391042 103 ntBASIC0.97□□□□□ -2.25
VCPP55072 Y_RNA.631-201ENST00000459607 101 ntBASIC0.97□□□□□ -2.25
VCPP55072 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
VCPP55072 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.97□□□□□ -2.25
VCPP55072 RNU7-115P-201ENST00000516433 55 ntBASIC0.97□□□□□ -2.25
VCPP55072 Y_RNA.714-201ENST00000517065 90 ntBASIC0.97□□□□□ -2.25
VCPP55072 Y_RNA.715-201ENST00000517082 110 ntBASIC0.97□□□□□ -2.25
VCPP55072 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.97□□□□□ -2.25
VCPP55072 AC104695.3-201ENST00000604052 296 ntBASIC0.97□□□□□ -2.25
VCPP55072 AL627230.5-201ENST00000619807 58 ntBASIC0.97□□□□□ -2.25
VCPP55072 AC068700.1-201ENST00000565862 3754 ntBASIC0.97□□□□□ -2.25
VCPP55072 Y_RNA.61-201ENST00000362835 102 ntBASIC0.96□□□□□ -2.26
VCPP55072 RNU4-80P-201ENST00000363200 141 ntBASIC0.96□□□□□ -2.26
VCPP55072 Y_RNA.183-201ENST00000363882 113 ntBASIC0.96□□□□□ -2.26
VCPP55072 Y_RNA.203-201ENST00000364106 102 ntBASIC0.96□□□□□ -2.26
VCPP55072 SNORD50B-201ENST00000364995 70 ntBASIC0.96□□□□□ -2.26
VCPP55072 AC117470.1-201ENST00000381974 330 ntBASIC0.96□□□□□ -2.26
VCPP55072 Y_RNA.535-201ENST00000384612 99 ntBASIC0.96□□□□□ -2.26
VCPP55072 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.96□□□□□ -2.26
VCPP55072 RPL23AP54-201ENST00000495129 419 ntBASIC0.96□□□□□ -2.26
VCPP55072 RNU6-397P-201ENST00000516226 104 ntBASIC0.96□□□□□ -2.26
VCPP55072 RNU6-988P-201ENST00000519081 107 ntBASIC0.96□□□□□ -2.26
VCPP55072 AC136628.3-201ENST00000521868 290 ntBASIC0.96□□□□□ -2.26
VCPP55072 AC127455.1-201ENST00000565496 145 ntBASIC0.96□□□□□ -2.26
VCPP55072 MIR4300-201ENST00000581016 96 ntBASIC0.96□□□□□ -2.26
VCPP55072 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
VCPP55072 AL096861.1-201ENST00000610899 123 ntBASIC0.96□□□□□ -2.26
VCPP55072 MIR376A1-201ENST00000616574 68 ntBASIC0.96□□□□□ -2.26
VCPP55072 MIR548AY-201ENST00000617669 107 ntBASIC0.96□□□□□ -2.26
VCPP55072 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
VCPP55072 Y_RNA.128-201ENST00000363391 112 ntBASIC0.95□□□□□ -2.26
VCPP55072 SNORD113-8-201ENST00000363497 74 ntBASIC0.95□□□□□ -2.26
VCPP55072 Y_RNA.222-201ENST00000364264 102 ntBASIC0.95□□□□□ -2.26
VCPP55072 RNU6-450P-201ENST00000364654 107 ntBASIC0.95□□□□□ -2.26
VCPP55072 Y_RNA.389-201ENST00000383924 113 ntBASIC0.95□□□□□ -2.26
VCPP55072 Y_RNA.394-201ENST00000383942 103 ntBASIC0.95□□□□□ -2.26
VCPP55072 MIR516B2-201ENST00000385190 85 ntBASIC0.95□□□□□ -2.26
VCPP55072 MIR136-201ENST00000385207 82 ntBASIC0.95□□□□□ -2.26
VCPP55072 RNU6-1248P-201ENST00000391096 64 ntBASIC0.95□□□□□ -2.26
VCPP55072 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.95□□□□□ -2.26
VCPP55072 MIR1252-201ENST00000408861 65 ntBASIC0.95□□□□□ -2.26
VCPP55072 RNU6-101P-201ENST00000410323 104 ntBASIC0.95□□□□□ -2.26
VCPP55072 HMGN2P32-201ENST00000444648 269 ntBASIC0.95□□□□□ -2.26
VCPP55072 SNORD111.1-201ENST00000516421 86 ntBASIC0.95□□□□□ -2.26
VCPP55072 RNU6-897P-201ENST00000517135 105 ntBASIC0.95□□□□□ -2.26
VCPP55072 Y_RNA.721-201ENST00000517207 102 ntBASIC0.95□□□□□ -2.26
VCPP55072 AC090142.3-201ENST00000519012 385 ntBASIC0.95□□□□□ -2.26
VCPP55072 RAC1P9-201ENST00000604990 392 ntBASIC0.95□□□□□ -2.26
VCPP55072 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
VCPP55072 Y_RNA.363-201ENST00000365529 113 ntBASIC0.94□□□□□ -2.26
VCPP55072 SNORD115-46-201ENST00000390982 71 ntBASIC0.94□□□□□ -2.26
VCPP55072 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.94□□□□□ -2.26
VCPP55072 AC134503.1-201ENST00000633048 54 ntBASIC0.94□□□□□ -2.26
VCPP55072 RNU6-1048P-201ENST00000364054 107 ntBASIC0.93□□□□□ -2.26
VCPP55072 RNU6-801P-201ENST00000364087 105 ntBASIC0.93□□□□□ -2.26
VCPP55072 Y_RNA.274-201ENST00000364714 101 ntBASIC0.93□□□□□ -2.26
VCPP55072 RNU6-969P-201ENST00000383900 105 ntBASIC0.93□□□□□ -2.26
VCPP55072 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
VCPP55072 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
VCPP55072 Y_RNA.602-201ENST00000410535 92 ntBASIC0.93□□□□□ -2.26
VCPP55072 RNU2-14P-201ENST00000411053 191 ntBASIC0.93□□□□□ -2.26
VCPP55072 RNU7-141P-201ENST00000459304 62 ntBASIC0.93□□□□□ -2.26
VCPP55072 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
VCPP55072 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
VCPP55072 RNU6-191P-201ENST00000516295 94 ntBASIC0.93□□□□□ -2.26
VCPP55072 SNORA74.3-201ENST00000517108 154 ntBASIC0.93□□□□□ -2.26
VCPP55072 MIR3192-201ENST00000584920 77 ntBASIC0.93□□□□□ -2.26
VCPP55072 JPX_2.1-201ENST00000614161 69 ntBASIC0.93□□□□□ -2.26
VCPP55072 AL442644.1-201ENST00000454390 3105 ntBASIC0.92□□□□□ -2.26
VCPP55072 MIR330-201ENST00000362196 94 ntBASIC0.92□□□□□ -2.26
VCPP55072 Y_RNA.138-201ENST00000363462 102 ntBASIC0.92□□□□□ -2.26
VCPP55072 RNU6-1209P-201ENST00000363655 107 ntBASIC0.92□□□□□ -2.26
VCPP55072 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
VCPP55072 SNORA22B-201ENST00000383876 138 ntBASIC0.92□□□□□ -2.26
VCPP55072 Y_RNA.418-201ENST00000384029 102 ntBASIC0.92□□□□□ -2.26
VCPP55072 SNORA72.4-201ENST00000384174 132 ntBASIC0.92□□□□□ -2.26
VCPP55072 RNU6-102P-201ENST00000384485 104 ntBASIC0.92□□□□□ -2.26
VCPP55072 MIR15B-201ENST00000385045 98 ntBASIC0.92□□□□□ -2.26
VCPP55072 SNORA36B-201ENST00000410438 131 ntBASIC0.92□□□□□ -2.26
VCPP55072 HSPE1P25-201ENST00000455484 251 ntBASIC0.92□□□□□ -2.26
VCPP55072 snoU13.25-201ENST00000458945 104 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms