Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 RNU4-84P-201ENST00000364200 139 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 SNORA72-201ENST00000384339 132 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 MIR196A1-201ENST00000388006 70 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 RNU4-30P-201ENST00000410245 143 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.64□□□□□ -2.51
NUP98P52948 MIR3915-201ENST00000578518 97 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 AC244669.1-204ENST00000621564 178 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 MIR4788-201ENST00000639104 80 ntBASIC-0.64□□□□□ -2.51
NUP98P52948 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 RNU6-268P-201ENST00000364174 107 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 SNORD28-201ENST00000384706 75 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 RNU6-248P-201ENST00000410720 107 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 AC236972.2-201ENST00000434979 310 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 RPL39P25-201ENST00000449384 154 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 RNU7-67P-201ENST00000459003 62 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 CR383656.4-201ENST00000546909 122 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 MIR5706-201ENST00000579841 80 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 MIR3681-201ENST00000580089 72 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 MIR4436A-201ENST00000585278 85 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 AC007494.3-201ENST00000624660 743 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 AC010332.2-201ENST00000613083 1904 ntBASIC-0.65□□□□□ -2.51
NUP98P52948 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.66□□□□□ -2.51
NUP98P52948 SNORD114-11-201ENST00000363738 75 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 RNY1P7-201ENST00000384743 110 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 RNY3P10-201ENST00000384764 102 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 SNORD93-201ENST00000408813 74 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 FCF1P9-201ENST00000412546 282 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 RPL21P38-201ENST00000418090 167 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 RNU7-73P-201ENST00000458743 63 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 AC091959.1-201ENST00000495857 238 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 PRDX4P1-201ENST00000507189 574 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 RNA5SP47-201ENST00000517230 109 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.66□□□□□ -2.51
NUP98P52948 MIR4639-201ENST00000584938 69 ntBASIC-0.66□□□□□ -2.51
NUP98P52948 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.66□□□□□ -2.52
NUP98P52948 MTND1P27-201ENST00000451117 902 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 AC107297.1-201ENST00000459991 176 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 LRRC34P1-201ENST00000542742 915 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 AC040904.1-201ENST00000590850 223 ntBASIC-0.66□□□□□ -2.52
NUP98P52948 RNU4-32P-201ENST00000363404 141 ntBASIC-0.67□□□□□ -2.52
NUP98P52948 RNU6-595P-201ENST00000363944 107 ntBASIC-0.67□□□□□ -2.52
NUP98P52948 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.67□□□□□ -2.52
NUP98P52948 MTCO2P19-201ENST00000427513 598 ntBASIC-0.67□□□□□ -2.52
NUP98P52948 SNORD11.1-201ENST00000459482 85 ntBASIC-0.67□□□□□ -2.52
NUP98P52948 AC083904.1-201ENST00000487828 231 ntBASIC-0.67□□□□□ -2.52
NUP98P52948 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.67□□□□□ -2.52
NUP98P52948 AC106754.1-201ENST00000562632 1513 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 SNORA72.3-201ENST00000365074 132 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 MT-TH-201ENST00000387441 69 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 SNORA26.5-201ENST00000391215 123 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 SNORA75.4-201ENST00000391278 119 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 AC105029.1-201ENST00000520250 669 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 AC124303.1-201ENST00000605703 360 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 AC134878.1-201ENST00000619901 243 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 RNU6-535P-201ENST00000384722 107 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.68□□□□□ -2.52
NUP98P52948 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 SNORA18.4-201ENST00000516440 124 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.68□□□□□ -2.52
NUP98P52948 AC010205.1-201ENST00000616668 449 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 AL162376.1-201ENST00000624117 175 ntBASIC-0.68□□□□□ -2.52
NUP98P52948 RNU6-161P-201ENST00000363051 106 ntBASIC-0.69□□□□□ -2.52
NUP98P52948 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.69□□□□□ -2.52
NUP98P52948 RNU6-596P-201ENST00000365395 98 ntBASIC-0.69□□□□□ -2.52
NUP98P52948 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.69□□□□□ -2.52
NUP98P52948 MIR3925-201ENST00000584674 77 ntBASIC-0.69□□□□□ -2.52
NUP98P52948 AC004467.1-201ENST00000615678 330 ntBASIC-0.69□□□□□ -2.52
NUP98P52948 SNORD115-30-201ENST00000364117 82 ntBASIC-0.7□□□□□ -2.52
NUP98P52948 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.7□□□□□ -2.52
NUP98P52948 RNU6-584P-201ENST00000410350 95 ntBASIC-0.7□□□□□ -2.52
NUP98P52948 AL031667.1-201ENST00000440222 725 ntBASIC-0.7□□□□□ -2.52
NUP98P52948 MIR4432-201ENST00000581823 84 ntBASIC-0.7□□□□□ -2.52
NUP98P52948 MIR3672-201ENST00000584290 82 ntBASIC-0.7□□□□□ -2.52
NUP98P52948 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 MIR215-201ENST00000384858 110 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 MIR501-201ENST00000390204 84 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 MTND5P34-201ENST00000568888 325 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 SNORD114-14-201ENST00000362723 75 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 MIR563-201ENST00000385080 79 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 SNORA40.5-201ENST00000391061 128 ntBASIC-0.71□□□□□ -2.52
NUP98P52948 SNORA75.1-201ENST00000391130 148 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms