Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.95□□□□□ -2.56
GTF2A1P52655 RNU2-61P-201ENST00000411069 191 ntBASIC-0.95□□□□□ -2.56
GTF2A1P52655 MTND1P11-201ENST00000456661 876 ntBASIC-0.95□□□□□ -2.56
GTF2A1P52655 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.95□□□□□ -2.56
GTF2A1P52655 SNORD115-34-201ENST00000362441 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-12-201ENST00000362583 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-29-201ENST00000362834 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-9-201ENST00000362912 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-21-201ENST00000362963 81 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-14-201ENST00000363090 81 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-13-201ENST00000363358 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-41-201ENST00000363608 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-11-201ENST00000363616 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-5-201ENST00000363633 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-39-201ENST00000363694 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-4-201ENST00000363810 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-16-201ENST00000363887 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-6-201ENST00000363942 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-42-201ENST00000364273 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-15-201ENST00000364809 81 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-1-201ENST00000364961 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-26-201ENST00000365067 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-10-201ENST00000365073 81 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-43-201ENST00000365503 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-36-201ENST00000365629 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 RNU6-128P-201ENST00000383976 107 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORA1-201ENST00000384107 130 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 RNU6-708P-201ENST00000384217 107 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 RNU6-95P-201ENST00000384697 107 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORA40.4-201ENST00000390971 128 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 AL031003.1-201ENST00000404229 172 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.96□□□□□ -2.56
GTF2A1P52655 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.96□□□□□ -2.56
GTF2A1P52655 MTATP6P13-201ENST00000438531 667 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 RPL7P42-201ENST00000481005 679 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORA40.9-201ENST00000515895 93 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 MTND5P34-201ENST00000568888 325 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 AL133255.1-201ENST00000606374 441 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 SNORD115-40-201ENST00000606510 82 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 AC092954.2-201ENST00000609103 430 ntBASIC-0.96□□□□□ -2.56
GTF2A1P52655 MIR101-2-201ENST00000362195 79 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 RNU4-66P-201ENST00000365199 138 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 SNORD72-201ENST00000390994 80 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 AL603910.2-201ENST00000407268 136 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 AC108059.2-201ENST00000434626 151 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 RNU6-758P-201ENST00000516292 89 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 LRRC34P1-201ENST00000542742 915 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 JPX_2.1-201ENST00000614161 69 ntBASIC-0.97□□□□□ -2.56
GTF2A1P52655 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.98□□□□□ -2.57
GTF2A1P52655 RNU6-595P-201ENST00000363944 107 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
GTF2A1P52655 SNORD37.1-201ENST00000390968 65 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 SNORA3B-201ENST00000391305 131 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 CHEK2P4-201ENST00000450340 246 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 RNU2-11P-201ENST00000459191 187 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.98□□□□□ -2.57
GTF2A1P52655 AP000942.4-201ENST00000604811 241 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 AP001330.5-201ENST00000607176 411 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.98□□□□□ -2.57
GTF2A1P52655 AC084368.1-201ENST00000620935 65 ntBASIC-0.98□□□□□ -2.57
GTF2A1P52655 MTND5P32-201ENST00000560711 1802 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 RNU4-75P-201ENST00000364621 146 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 MT-TQ-201ENST00000387372 72 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 RNU6-192P-201ENST00000391253 100 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 RNU6-437P-201ENST00000459408 95 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.99□□□□□ -2.57
GTF2A1P52655 RNA5SP401-201ENST00000515920 127 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 AP003072.1-201ENST00000531740 145 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 MIR3913-1-201ENST00000577744 102 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 AL596211.1-201ENST00000569873 2277 ntBASIC-0.99□□□□□ -2.57
GTF2A1P52655 Y_RNA.241-201ENST00000364470 117 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 Y_RNA.490-201ENST00000384413 102 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 RNU6-601P-201ENST00000384540 107 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 Y_RNA.547-201ENST00000384654 119 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 U8.15-201ENST00000390947 134 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 AC096949.1-201ENST00000412047 152 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 Z95118.1-201ENST00000421372 247 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 MTND2P14-201ENST00000482139 351 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 AC010424.1-201ENST00000506336 297 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 RNU6-1265P-201ENST00000516342 103 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 RNU7-25P-201ENST00000516544 62 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 AC024405.2-202ENST00000532731 184 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 MIR4491-201ENST00000581087 68 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 AC108676.2-201ENST00000605225 163 ntBASIC-1□□□□□ -2.57
GTF2A1P52655 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 RPL39P25-201ENST00000449384 154 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms