Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 U8.19-201ENST00000459095 133 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 RNU6-1132P-201ENST00000459214 107 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 MTND1P19-201ENST00000511780 315 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 SCARNA24.2-201ENST00000516968 130 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 MIR4282-201ENST00000583613 67 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 MIR4762-201ENST00000585261 75 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 AL078603.1-201ENST00000603824 313 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 AC062037.2-201ENST00000610137 73 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 AL008718.3-201ENST00000610217 321 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 AC068647.2-201ENST00000637380 353 ntBASIC1.33□□□□□ -2.2
CLCN4P51793 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLCN4P51793 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 RNU6-674P-201ENST00000363831 107 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 RNU6-899P-201ENST00000363947 107 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 RNU6-1048P-201ENST00000364054 107 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 U8.5-201ENST00000364528 136 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 RNU6-702P-201ENST00000364982 107 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 RNU6-42P-201ENST00000384165 107 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 RNU6-662P-201ENST00000384253 104 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 RNA5SP482-201ENST00000391269 118 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 PGBD4P5-201ENST00000445958 426 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 AC233266.1-201ENST00000454518 96 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.32□□□□□ -2.2
CLCN4P51793 RNA5SP220-201ENST00000516298 104 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 AC005357.1-201ENST00000588399 301 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 POLR3GP1-201ENST00000594073 261 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 AC242852.1-201ENST00000612151 96 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 AC013791.1-201ENST00000616619 62 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 AC073349.3-201ENST00000617616 186 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 AC244015.1-201ENST00000622301 99 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 SNORD3E-202ENST00000627253 216 ntBASIC1.32□□□□□ -2.2
CLCN4P51793 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
CLCN4P51793 MIRLET7C-201ENST00000362160 84 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 RNU6-740P-201ENST00000364734 105 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 RNU6-574P-201ENST00000384265 107 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 MIR548H3-201ENST00000408771 118 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
CLCN4P51793 Z98949.2-201ENST00000440996 144 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.31□□□□□ -2.2
CLCN4P51793 AL049830.1-201ENST00000468034 425 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 AC117454.1-201ENST00000491120 168 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 AL365434.2-201ENST00000607979 234 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.31□□□□□ -2.2
CLCN4P51793 AL513423.1-201ENST00000621695 132 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 snoU18.1-201ENST00000629629 71 ntBASIC1.31□□□□□ -2.2
CLCN4P51793 AL442644.1-201ENST00000454390 3105 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLCN4P51793 Y_RNA.20-201ENST00000362479 113 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 RNU4-41P-201ENST00000364426 143 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 Y_RNA.253-201ENST00000364562 112 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 Y_RNA.350-201ENST00000365409 98 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 RNU6-144P-201ENST00000383951 107 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 RNU6-1080P-201ENST00000383982 107 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 Y_RNA.416-201ENST00000384014 113 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 RNU6-1289P-201ENST00000384431 106 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 AL603910.2-201ENST00000407268 136 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 SNORA36B-201ENST00000410438 131 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 RPL39P38-201ENST00000467018 153 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.3□□□□□ -2.2
CLCN4P51793 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 MIR4643-201ENST00000577473 78 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 AC011921.3-201ENST00000605540 361 ntBASIC1.3□□□□□ -2.2
CLCN4P51793 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.3□□□□□ -2.2
CLCN4P51793 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
CLCN4P51793 SNORD114-27-201ENST00000363766 70 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 RNU6-211P-201ENST00000384047 107 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 Y_RNA.466-201ENST00000384294 113 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 RNU6-424P-201ENST00000384367 105 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 RPS27P16-201ENST00000425758 201 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 BTF3P11-201ENST00000426582 477 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 RNU6-437P-201ENST00000459408 95 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 Y_RNA.680-201ENST00000516441 93 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 MIR5692C2-201ENST00000577959 77 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 MIR5688-201ENST00000580619 83 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 AL591926.4-201ENST00000616895 298 ntBASIC1.29□□□□□ -2.2
CLCN4P51793 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.29□□□□□ -2.2
CLCN4P51793 AC134026.1-201ENST00000623249 2239 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 Y_RNA.117-201ENST00000363294 101 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 Y_RNA.203-201ENST00000364106 102 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 Y_RNA.478-201ENST00000384358 107 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 Y_RNA.539-201ENST00000384635 107 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 MT-TG-201ENST00000387429 68 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 MTCO2P33-201ENST00000402100 465 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 RNU6-651P-201ENST00000411040 105 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 RPL23AP54-201ENST00000495129 419 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 RNU6-1023P-201ENST00000516137 106 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.28□□□□□ -2.2
CLCN4P51793 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 BX284668.6-201ENST00000606899 438 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 AL021707.8-201ENST00000609428 183 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 MIR6734-201ENST00000621166 68 ntBASIC1.28□□□□□ -2.2
CLCN4P51793 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CLCN4P51793 MIR520E-201ENST00000384867 87 ntBASIC1.27□□□□□ -2.21
CLCN4P51793 MIR522-201ENST00000385071 87 ntBASIC1.27□□□□□ -2.21
CLCN4P51793 MIR660-201ENST00000385235 97 ntBASIC1.27□□□□□ -2.21
CLCN4P51793 MIR526A2-201ENST00000390198 65 ntBASIC1.27□□□□□ -2.21
CLCN4P51793 MIR1278-201ENST00000408753 81 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 1389.8 ms