Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC005000.2-201ENST00000605468 310 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF144AP50876 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RNF144AP50876 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNF144AP50876 MIRLET7C-201ENST00000362160 84 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 Y_RNA.470-201ENST00000384307 117 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 MIR670-201ENST00000390142 98 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 SNORA11.4-201ENST00000408823 129 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 Y_RNA.620-201ENST00000411009 88 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 AC069257.2-201ENST00000441819 155 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 SNORD105B-201ENST00000458770 79 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 RPS29P12-201ENST00000460178 152 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 IGKV2-26-201ENST00000518305 343 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF144AP50876 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.13□□□□□ -1.91
RNF144AP50876 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF144AP50876 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF144AP50876 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF144AP50876 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF144AP50876 SNORA22.1-201ENST00000362701 134 ntBASIC3.12□□□□□ -1.91
RNF144AP50876 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
RNF144AP50876 RN7SKP192-201ENST00000411291 327 ntBASIC3.12□□□□□ -1.91
RNF144AP50876 CYCSP4-201ENST00000429682 331 ntBASIC3.12□□□□□ -1.91
RNF144AP50876 SNORA31.26-201ENST00000517250 137 ntBASIC3.12□□□□□ -1.91
RNF144AP50876 AC104027.1-201ENST00000521887 300 ntBASIC3.12□□□□□ -1.91
RNF144AP50876 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF144AP50876 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF144AP50876 AC103810.6-201ENST00000606708 136 ntBASIC3.12□□□□□ -1.91
RNF144AP50876 AL356274.2-201ENST00000624379 3752 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 RNU6-23P-201ENST00000363283 107 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 SNORD116-10-201ENST00000363791 102 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 SNORA1.1-201ENST00000364671 133 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 Y_RNA.611-201ENST00000410682 108 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 MIR4439-201ENST00000583746 80 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 U3.45-201ENST00000607547 219 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 AC073476.4-201ENST00000628409 72 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF144AP50876 AC017071.1-201ENST00000564407 2204 ntBASIC3.11□□□□□ -1.91
RNF144AP50876 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF144AP50876 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF144AP50876 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RNF144AP50876 RNU6-1313P-201ENST00000362622 102 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 SNORA1.2-201ENST00000365189 134 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 SNORD58A-201ENST00000383875 65 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 U8.15-201ENST00000390947 134 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 RNU7-67P-201ENST00000459003 62 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 RNU6-958P-201ENST00000516995 106 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 AC019288.1-201ENST00000557918 224 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 MIR3169-201ENST00000578032 83 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 ELOCP29-201ENST00000588193 334 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 MIR4662A-201ENST00000637499 67 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 AP000648.3-201ENST00000623539 4507 ntBASIC3.1□□□□□ -1.91
RNF144AP50876 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF144AP50876 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RNF144AP50876 RNU1-70P-201ENST00000362618 164 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 SNORD21-201ENST00000383953 95 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 SNORA70.7-201ENST00000384159 133 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 MIR7-3-201ENST00000384898 110 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RNF144AP50876 RNA5SP261-201ENST00000410536 106 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 MIR1270-201ENST00000459320 83 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 RNU7-34P-201ENST00000459394 64 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 AC108729.3-201ENST00000513484 108 ntBASIC3.09□□□□□ -1.91
RNF144AP50876 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF144AP50876 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.09□□□□□ -1.91
RNF144AP50876 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RNF144AP50876 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RNF144AP50876 MAPK10-266ENST00000641066 6555 ntBASIC3.09□□□□□ -1.92
RNF144AP50876 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RNF144AP50876 Y_RNA.4-201ENST00000362333 112 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 RNA5SP119-201ENST00000362715 117 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 RNA5SP50-201ENST00000363731 107 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 Y_RNA.370-201ENST00000365589 108 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 SNORA32-201ENST00000384072 121 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 RNA5SP171-201ENST00000391071 115 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 RNU7-53P-201ENST00000516705 60 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF144AP50876 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF144AP50876 MIR7851-201ENST00000610611 160 ntBASIC3.08□□□□□ -1.92
RNF144AP50876 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF144AP50876 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF144AP50876 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF144AP50876 RNU6-833P-201ENST00000363486 107 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 SNORD56.3-201ENST00000363507 71 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 Y_RNA.191-201ENST00000363972 113 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 RNU6-652P-201ENST00000365488 107 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 U8.16-201ENST00000391279 133 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF144AP50876 RN7SL293P-201ENST00000481765 281 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 SNORA31.10-201ENST00000516482 106 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF144AP50876 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF144AP50876 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF144AP50876 MIR376B-201ENST00000614515 100 ntBASIC3.07□□□□□ -1.92
RNF144AP50876 MIR6841-201ENST00000637129 72 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms