Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.02□□□□□ -2.57
SRP9P49458 USMG5P1-201ENST00000425964 177 ntBASIC-1.02□□□□□ -2.57
SRP9P49458 EIF1P2-201ENST00000428233 350 ntBASIC-1.02□□□□□ -2.57
SRP9P49458 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.02□□□□□ -2.57
SRP9P49458 RPL39P25-201ENST00000449384 154 ntBASIC-1.02□□□□□ -2.57
SRP9P49458 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.02□□□□□ -2.57
SRP9P49458 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.02□□□□□ -2.57
SRP9P49458 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.02□□□□□ -2.57
SRP9P49458 AC087685.1-201ENST00000587507 141 ntBASIC-1.02□□□□□ -2.57
SRP9P49458 JPX_2.1-201ENST00000614161 69 ntBASIC-1.02□□□□□ -2.57
SRP9P49458 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.02□□□□□ -2.57
SRP9P49458 RNA5SP205-201ENST00000364653 136 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 MIR517A-201ENST00000385001 87 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 SNORA40.4-201ENST00000390971 128 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 RNU4-63P-201ENST00000411313 118 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 FCF1P9-201ENST00000412546 282 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 RNA5SP401-201ENST00000515920 127 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 LRRC34P1-201ENST00000542742 915 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 AC109347.2-201ENST00000610220 349 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 AC004223.4-201ENST00000612426 332 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 MIR6507-201ENST00000613630 70 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 AC105081.1-201ENST00000617727 106 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 AC084368.1-201ENST00000620935 65 ntBASIC-1.03□□□□□ -2.57
SRP9P49458 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 SNORD72-201ENST00000390994 80 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 AL031003.1-201ENST00000404229 172 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 MTATP6P13-201ENST00000438531 667 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 SNORD42A-201ENST00000459584 64 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 AL162376.1-201ENST00000624117 175 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 AL391099.1-201ENST00000624635 187 ntBASIC-1.04□□□□□ -2.58
SRP9P49458 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 RNU6-879P-201ENST00000364328 108 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 RNU6-726P-201ENST00000364680 107 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 SNORA72.6-201ENST00000384520 129 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 MIR548L-201ENST00000408303 86 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 RNU6-248P-201ENST00000410720 107 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 MTND1P11-201ENST00000456661 876 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 MIR3913-1-201ENST00000577744 102 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 AC008507.4-201ENST00000585464 127 ntBASIC-1.05□□□□□ -2.58
SRP9P49458 MIR101-2-201ENST00000362195 79 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 RNU4-20P-201ENST00000365601 151 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 RNU6-95P-201ENST00000384697 107 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 AC108059.2-201ENST00000434626 151 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 SNORA40.9-201ENST00000515895 93 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 RNU6-765P-201ENST00000516916 99 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 AC092954.2-201ENST00000609103 430 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 AC006441.5-201ENST00000612680 209 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 AC005609.4-201ENST00000625071 447 ntBASIC-1.06□□□□□ -2.58
SRP9P49458 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 RNY4P3-201ENST00000365254 95 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 SNORA3B-201ENST00000391305 131 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 MTCO3P40-201ENST00000392516 676 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 MIR876-201ENST00000401147 81 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 AL603910.2-201ENST00000407268 136 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 AC010424.1-201ENST00000506336 297 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.07□□□□□ -2.58
SRP9P49458 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.07□□□□□ -2.58
SRP9P49458 MIR4436A-201ENST00000585278 85 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 AC245008.1-201ENST00000608123 476 ntBASIC-1.07□□□□□ -2.58
SRP9P49458 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.07□□□□□ -2.58
SRP9P49458 SNORA1-201ENST00000384107 130 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
SRP9P49458 RNU6-192P-201ENST00000391253 100 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 RNU6-735P-201ENST00000410612 107 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 RNU2-61P-201ENST00000411069 191 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 RPL7P42-201ENST00000481005 679 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 AC019193.3-201ENST00000609144 554 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 uc_338.28-201ENST00000612082 187 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 AC004467.1-201ENST00000615678 330 ntBASIC-1.08□□□□□ -2.58
SRP9P49458 RNA5SP245-201ENST00000364239 121 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 U8.6-201ENST00000364939 135 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 U8.15-201ENST00000390947 134 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 CHEK2P4-201ENST00000450340 246 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 RNU7-25P-201ENST00000516544 62 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 AC131281.1-201ENST00000522984 164 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms