Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-1203P-201ENST00000410703 110 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 RNU2-14P-201ENST00000411053 191 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 HMGN2P32-201ENST00000444648 269 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 SNORD45.4-201ENST00000516629 73 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NEDD4P46934 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
NEDD4P46934 RNU6-1048P-201ENST00000364054 107 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 Y_RNA.242-201ENST00000364473 110 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 Y_RNA.336-201ENST00000365307 109 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 RNU6-763P-201ENST00000390865 106 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 MTCO2P33-201ENST00000402100 465 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 PIGPP3-201ENST00000425307 415 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 MTND5P22-201ENST00000458380 195 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 Y_RNA.637-201ENST00000459424 114 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 AC091959.1-201ENST00000495857 238 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 SERF1AP1-201ENST00000514575 187 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 RNU6-917P-201ENST00000516294 104 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 RMST_2.1-201ENST00000617263 136 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 MIR8065-201ENST00000620577 100 ntBASIC1.16□□□□□ -2.22
NEDD4P46934 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NEDD4P46934 UBE2WP1-201ENST00000362030 340 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 RNU6-1272P-201ENST00000362776 107 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 RNU6-1209P-201ENST00000363655 107 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 RNU6-738P-201ENST00000384531 106 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.15□□□□□ -2.22
NEDD4P46934 RNU6-1338P-201ENST00000516328 91 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 RNU6-635P-201ENST00000516651 102 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 AC013791.1-201ENST00000616619 62 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.15□□□□□ -2.22
NEDD4P46934 RNU6-1205P-201ENST00000363625 106 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 Y_RNA.176-201ENST00000363815 109 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 Y_RNA.217-201ENST00000364214 105 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 SNORD50B-201ENST00000364995 70 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 MIR1298-201ENST00000408783 112 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.15□□□□□ -2.23
NEDD4P46934 Y_RNA.641-201ENST00000459414 105 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 TRBVB-201ENST00000477100 408 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 RNU6-922P-201ENST00000516753 99 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 RN7SKP88-201ENST00000516847 250 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 AC005357.1-201ENST00000588399 301 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 AC008737.2-201ENST00000599446 118 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 7SK.8-201ENST00000612110 250 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 7SK.11-201ENST00000615477 250 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 7SK.13-201ENST00000622040 250 ntBASIC1.15□□□□□ -2.23
NEDD4P46934 AC134026.1-201ENST00000623249 2239 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 SNORD14E-201ENST00000364009 85 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 Y_RNA.376-201ENST00000365638 108 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 SNORD26-201ENST00000384147 75 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 Y_RNA.574-201ENST00000384766 95 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 MIR15B-201ENST00000385045 98 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 MIR1302-6-201ENST00000408466 90 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 MIR548F4-201ENST00000408515 105 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.14□□□□□ -2.23
NEDD4P46934 MIR5692C2-201ENST00000577959 77 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 MIR5688-201ENST00000580619 83 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 FAM106DP-201ENST00000586416 501 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.14□□□□□ -2.23
NEDD4P46934 MIR8062-201ENST00000621515 85 ntBASIC1.14□□□□□ -2.23
NEDD4P46934 AC068700.1-201ENST00000565862 3754 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 MIR335-201ENST00000362173 94 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 Y_RNA.16-201ENST00000362421 102 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 Y_RNA.540-201ENST00000384638 111 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 MIR136-201ENST00000385207 82 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 SNORD41-201ENST00000386967 70 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 RNA5SP496-201ENST00000391240 109 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 AC023449.1-201ENST00000454464 154 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 MTATP8P1-201ENST00000467115 207 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 RNU6-570P-201ENST00000517051 105 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 DEFB108E-201ENST00000524692 240 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 AL117187.1-201ENST00000555482 181 ntBASIC1.13□□□□□ -2.23
NEDD4P46934 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.13□□□□□ -2.23
NEDD4P46934 RNU6-238P-201ENST00000363313 106 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 Y_RNA.459-201ENST00000384251 102 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 RNU6-662P-201ENST00000384253 104 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 MIR526A1-201ENST00000384897 85 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 SCARNA24.2-201ENST00000516968 130 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 RPL23AP91-201ENST00000569211 455 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
NEDD4P46934 AP001282.2-201ENST00000616149 309 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 snoU18.1-201ENST00000629629 71 ntBASIC1.12□□□□□ -2.23
NEDD4P46934 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NEDD4P46934 RNU6-442P-201ENST00000383968 104 ntBASIC1.11□□□□□ -2.23
NEDD4P46934 RNU6-42P-201ENST00000384165 107 ntBASIC1.11□□□□□ -2.23
NEDD4P46934 MIR802-201ENST00000390235 94 ntBASIC1.11□□□□□ -2.23
NEDD4P46934 RNU6-1054P-201ENST00000411293 104 ntBASIC1.11□□□□□ -2.23
NEDD4P46934 RPL39P39-201ENST00000455840 151 ntBASIC1.11□□□□□ -2.23
NEDD4P46934 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.11□□□□□ -2.23
NEDD4P46934 RNA5SP220-201ENST00000516298 104 ntBASIC1.11□□□□□ -2.23
NEDD4P46934 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.11□□□□□ -2.23
NEDD4P46934 MIR4724-201ENST00000579485 89 ntBASIC1.11□□□□□ -2.23
NEDD4P46934 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 Y_RNA.14-201ENST00000362415 103 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 Y_RNA.44-201ENST00000362676 108 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms