Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.35□□□□□ -2.19
ATRXP46100 Y_RNA.666-201ENST00000516187 112 ntBASIC1.35□□□□□ -2.19
ATRXP46100 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.35□□□□□ -2.19
ATRXP46100 MIR4423-201ENST00000580922 80 ntBASIC1.35□□□□□ -2.19
ATRXP46100 AC022217.4-201ENST00000604389 163 ntBASIC1.35□□□□□ -2.19
ATRXP46100 MIR8087-201ENST00000612745 78 ntBASIC1.35□□□□□ -2.19
ATRXP46100 Y_RNA.91-201ENST00000363042 107 ntBASIC1.34□□□□□ -2.19
ATRXP46100 Y_RNA.262-201ENST00000364641 102 ntBASIC1.34□□□□□ -2.19
ATRXP46100 DYNLT3P1-201ENST00000378574 347 ntBASIC1.34□□□□□ -2.19
ATRXP46100 RNU6-804P-201ENST00000384286 107 ntBASIC1.34□□□□□ -2.19
ATRXP46100 RNU2-55P-201ENST00000411146 174 ntBASIC1.34□□□□□ -2.19
ATRXP46100 SEPT7P4-201ENST00000437076 306 ntBASIC1.34□□□□□ -2.19
ATRXP46100 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.34□□□□□ -2.19
ATRXP46100 SNORA25.12-201ENST00000516202 82 ntBASIC1.34□□□□□ -2.19
ATRXP46100 AC022616.8-201ENST00000533569 253 ntBASIC1.34□□□□□ -2.19
ATRXP46100 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.34□□□□□ -2.19
ATRXP46100 ZNF702P-202ENST00000434269 1966 ntBASIC1.34□□□□□ -2.19
ATRXP46100 SNORD114-7-201ENST00000362520 77 ntBASIC1.34□□□□□ -2.2
ATRXP46100 SNORD45.3-201ENST00000363836 72 ntBASIC1.34□□□□□ -2.2
ATRXP46100 MIR616-201ENST00000385293 97 ntBASIC1.34□□□□□ -2.2
ATRXP46100 PCNPP3-201ENST00000393579 471 ntBASIC1.34□□□□□ -2.2
ATRXP46100 MIR873-201ENST00000401120 77 ntBASIC1.34□□□□□ -2.2
ATRXP46100 SNRPGP14-201ENST00000435400 219 ntBASIC1.34□□□□□ -2.2
ATRXP46100 RNU7-200P-201ENST00000516105 62 ntBASIC1.34□□□□□ -2.2
ATRXP46100 RNU6-406P-201ENST00000516470 107 ntBASIC1.34□□□□□ -2.2
ATRXP46100 MIR3684-201ENST00000579779 74 ntBASIC1.34□□□□□ -2.2
ATRXP46100 MIR4744-201ENST00000581563 82 ntBASIC1.34□□□□□ -2.2
ATRXP46100 AL591926.4-201ENST00000616895 298 ntBASIC1.34□□□□□ -2.2
ATRXP46100 SNORD116-18-201ENST00000383961 92 ntBASIC1.33□□□□□ -2.2
ATRXP46100 MIR526A2-201ENST00000390198 65 ntBASIC1.33□□□□□ -2.2
ATRXP46100 SNORD72-201ENST00000390994 80 ntBASIC1.33□□□□□ -2.2
ATRXP46100 MIR1298-201ENST00000408783 112 ntBASIC1.33□□□□□ -2.2
ATRXP46100 Y_RNA.629-201ENST00000411368 105 ntBASIC1.33□□□□□ -2.2
ATRXP46100 RNU6-1041P-201ENST00000516254 102 ntBASIC1.33□□□□□ -2.2
ATRXP46100 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
ATRXP46100 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.33□□□□□ -2.2
ATRXP46100 JPX_2.1-201ENST00000614161 69 ntBASIC1.33□□□□□ -2.2
ATRXP46100 AC073349.3-201ENST00000617616 186 ntBASIC1.33□□□□□ -2.2
ATRXP46100 SNORD114-23-201ENST00000363536 72 ntBASIC1.33□□□□□ -2.2
ATRXP46100 RNU6-1019P-201ENST00000364424 107 ntBASIC1.33□□□□□ -2.2
ATRXP46100 RNU6-117P-201ENST00000365415 107 ntBASIC1.33□□□□□ -2.2
ATRXP46100 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.33□□□□□ -2.2
ATRXP46100 RNU6-969P-201ENST00000383900 105 ntBASIC1.33□□□□□ -2.2
ATRXP46100 RNU6-125P-201ENST00000384505 107 ntBASIC1.33□□□□□ -2.2
ATRXP46100 RNU6-1168P-201ENST00000390831 104 ntBASIC1.33□□□□□ -2.2
ATRXP46100 AL162725.1-201ENST00000435405 301 ntBASIC1.33□□□□□ -2.2
ATRXP46100 SNORA31.11-201ENST00000516528 139 ntBASIC1.33□□□□□ -2.2
ATRXP46100 Y_RNA.240-201ENST00000364469 95 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU6-728P-201ENST00000365375 104 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU6-597P-201ENST00000365620 102 ntBASIC1.32□□□□□ -2.2
ATRXP46100 Y_RNA.441-201ENST00000384123 112 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU6-159P-201ENST00000391080 106 ntBASIC1.32□□□□□ -2.2
ATRXP46100 Y_RNA.584-201ENST00000391090 114 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.32□□□□□ -2.2
ATRXP46100 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.32□□□□□ -2.2
ATRXP46100 RPS29P29-201ENST00000456396 171 ntBASIC1.32□□□□□ -2.2
ATRXP46100 MRPS17P9-201ENST00000511924 393 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU6-346P-201ENST00000516288 111 ntBASIC1.32□□□□□ -2.2
ATRXP46100 SNORA81.3-201ENST00000517283 198 ntBASIC1.32□□□□□ -2.2
ATRXP46100 SUMO2P18-201ENST00000518873 252 ntBASIC1.32□□□□□ -2.2
ATRXP46100 CYCSP23-201ENST00000519781 313 ntBASIC1.32□□□□□ -2.2
ATRXP46100 AC024614.2-201ENST00000577584 372 ntBASIC1.32□□□□□ -2.2
ATRXP46100 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
ATRXP46100 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ATRXP46100 MIR411-201ENST00000362239 96 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU6-1020P-201ENST00000363684 107 ntBASIC1.32□□□□□ -2.2
ATRXP46100 Y_RNA.230-201ENST00000364348 109 ntBASIC1.32□□□□□ -2.2
ATRXP46100 SNORA16.1-201ENST00000364597 132 ntBASIC1.32□□□□□ -2.2
ATRXP46100 SNORA8.3-201ENST00000384679 139 ntBASIC1.32□□□□□ -2.2
ATRXP46100 SNORD23.1-201ENST00000408212 104 ntBASIC1.32□□□□□ -2.2
ATRXP46100 AC123900.1-201ENST00000420390 96 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU7-107P-201ENST00000459121 61 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU1-40P-201ENST00000516816 164 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNU1-97P-201ENST00000516872 164 ntBASIC1.32□□□□□ -2.2
ATRXP46100 SNORA31.26-201ENST00000517250 137 ntBASIC1.32□□□□□ -2.2
ATRXP46100 MIR3910-1-201ENST00000580936 111 ntBASIC1.32□□□□□ -2.2
ATRXP46100 RNY4P28-201ENST00000365281 93 ntBASIC1.31□□□□□ -2.2
ATRXP46100 RNU6-975P-201ENST00000384296 105 ntBASIC1.31□□□□□ -2.2
ATRXP46100 Y_RNA.488-201ENST00000384403 102 ntBASIC1.31□□□□□ -2.2
ATRXP46100 MIR626-201ENST00000385032 94 ntBASIC1.31□□□□□ -2.2
ATRXP46100 MIR29C-201ENST00000385231 88 ntBASIC1.31□□□□□ -2.2
ATRXP46100 AL117342.1-201ENST00000404861 406 ntBASIC1.31□□□□□ -2.2
ATRXP46100 MIR1265-201ENST00000408444 86 ntBASIC1.31□□□□□ -2.2
ATRXP46100 SNRPGP8-201ENST00000454064 226 ntBASIC1.31□□□□□ -2.2
ATRXP46100 AC127455.1-201ENST00000565496 145 ntBASIC1.31□□□□□ -2.2
ATRXP46100 AC104465.1-201ENST00000611365 139 ntBASIC1.31□□□□□ -2.2
ATRXP46100 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ATRXP46100 SNORD61-201ENST00000384252 73 ntBASIC1.31□□□□□ -2.2
ATRXP46100 RNU6-160P-201ENST00000384591 107 ntBASIC1.31□□□□□ -2.2
ATRXP46100 RNU6-1154P-201ENST00000391001 104 ntBASIC1.31□□□□□ -2.2
ATRXP46100 MIR1253-201ENST00000408273 105 ntBASIC1.31□□□□□ -2.2
ATRXP46100 MIR1197-201ENST00000408818 88 ntBASIC1.31□□□□□ -2.2
ATRXP46100 RNU6-383P-201ENST00000410864 94 ntBASIC1.31□□□□□ -2.2
ATRXP46100 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.31□□□□□ -2.2
ATRXP46100 RNU6-1270P-201ENST00000517128 108 ntBASIC1.31□□□□□ -2.2
ATRXP46100 AL391903.3-201ENST00000612158 163 ntBASIC1.31□□□□□ -2.2
ATRXP46100 uc_338.4-201ENST00000616635 176 ntBASIC1.31□□□□□ -2.2
ATRXP46100 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.31□□□□□ -2.2
ATRXP46100 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.31□□□□□ -2.2
ATRXP46100 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms