Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
CCNFP41002 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
CCNFP41002 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CCNFP41002 RNU6-647P-201ENST00000364243 107 ntBASIC2.58□□□□□ -2
CCNFP41002 RNA5SP126-201ENST00000365092 109 ntBASIC2.58□□□□□ -2
CCNFP41002 SNORA4.2-201ENST00000365313 147 ntBASIC2.58□□□□□ -2
CCNFP41002 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
CCNFP41002 MIR524-201ENST00000385242 87 ntBASIC2.58□□□□□ -2
CCNFP41002 RN7SKP200-201ENST00000410564 320 ntBASIC2.58□□□□□ -2
CCNFP41002 SNORD109B-201ENST00000458961 67 ntBASIC2.58□□□□□ -2
CCNFP41002 SNORD109A-201ENST00000459128 67 ntBASIC2.58□□□□□ -2
CCNFP41002 MIR3945-201ENST00000581853 98 ntBASIC2.58□□□□□ -2
CCNFP41002 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
CCNFP41002 AC006441.5-201ENST00000612680 209 ntBASIC2.58□□□□□ -2
CCNFP41002 AC134878.1-201ENST00000619901 243 ntBASIC2.58□□□□□ -2
CCNFP41002 U1.36-201ENST00000620684 176 ntBASIC2.58□□□□□ -2
CCNFP41002 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
CCNFP41002 SNORD115-28-201ENST00000363931 81 ntBASIC2.57□□□□□ -2
CCNFP41002 RNU6-215P-201ENST00000365169 102 ntBASIC2.57□□□□□ -2
CCNFP41002 Y_RNA.336-201ENST00000365307 109 ntBASIC2.57□□□□□ -2
CCNFP41002 SNORA48.1-201ENST00000390879 135 ntBASIC2.57□□□□□ -2
CCNFP41002 SNORA40.5-201ENST00000391061 128 ntBASIC2.57□□□□□ -2
CCNFP41002 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.57□□□□□ -2
CCNFP41002 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
CCNFP41002 RN7SKP132-201ENST00000516001 208 ntBASIC2.57□□□□□ -2
CCNFP41002 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.57□□□□□ -2
CCNFP41002 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.57□□□□□ -2
CCNFP41002 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
CCNFP41002 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.57□□□□□ -2
CCNFP41002 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCNFP41002 RNU6-44P-201ENST00000384045 107 ntBASIC2.56□□□□□ -2
CCNFP41002 Y_RNA.547-201ENST00000384654 119 ntBASIC2.56□□□□□ -2
CCNFP41002 AL034345.1-201ENST00000407768 123 ntBASIC2.56□□□□□ -2
CCNFP41002 RNU6-1064P-201ENST00000410626 104 ntBASIC2.56□□□□□ -2
CCNFP41002 AL035461.1-201ENST00000421490 332 ntBASIC2.56□□□□□ -2
CCNFP41002 CALM2P4-201ENST00000430810 426 ntBASIC2.56□□□□□ -2
CCNFP41002 HMGN2P32-201ENST00000444648 269 ntBASIC2.56□□□□□ -2
CCNFP41002 RNU7-34P-201ENST00000459394 64 ntBASIC2.56□□□□□ -2
CCNFP41002 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.56□□□□□ -2
CCNFP41002 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
CCNFP41002 Y_RNA.712-201ENST00000517011 92 ntBASIC2.56□□□□□ -2
CCNFP41002 AC078899.2-201ENST00000595282 212 ntBASIC2.56□□□□□ -2
CCNFP41002 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCNFP41002 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CCNFP41002 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCNFP41002 SNORA2.2-201ENST00000365473 135 ntBASIC2.55□□□□□ -2
CCNFP41002 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
CCNFP41002 RNU6-1189P-201ENST00000383958 107 ntBASIC2.55□□□□□ -2
CCNFP41002 RNA5SP501-201ENST00000410990 112 ntBASIC2.55□□□□□ -2
CCNFP41002 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
CCNFP41002 Y_RNA.630-201ENST00000411370 108 ntBASIC2.55□□□□□ -2
CCNFP41002 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.55□□□□□ -2
CCNFP41002 AL445646.1-201ENST00000431784 216 ntBASIC2.55□□□□□ -2
CCNFP41002 AL021397.1-201ENST00000451806 248 ntBASIC2.55□□□□□ -2
CCNFP41002 CYCTP-201ENST00000504253 315 ntBASIC2.55□□□□□ -2
CCNFP41002 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.55□□□□□ -2
CCNFP41002 RNU6-919P-201ENST00000516731 104 ntBASIC2.55□□□□□ -2
CCNFP41002 MIR4435-1-201ENST00000582552 80 ntBASIC2.55□□□□□ -2
CCNFP41002 AC108081.1-201ENST00000604358 221 ntBASIC2.55□□□□□ -2
CCNFP41002 MIR6129-201ENST00000616087 109 ntBASIC2.55□□□□□ -2
CCNFP41002 MIR376A2-201ENST00000636782 80 ntBASIC2.55□□□□□ -2
CCNFP41002 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCNFP41002 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
CCNFP41002 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCNFP41002 MIR449A-201ENST00000362113 91 ntBASIC2.54□□□□□ -2
CCNFP41002 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
CCNFP41002 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
CCNFP41002 SNORD38C-201ENST00000384381 69 ntBASIC2.54□□□□□ -2
CCNFP41002 RNU6-950P-201ENST00000384651 107 ntBASIC2.54□□□□□ -2
CCNFP41002 RNU6-476P-201ENST00000384726 107 ntBASIC2.54□□□□□ -2
CCNFP41002 MIR520A-201ENST00000384862 85 ntBASIC2.54□□□□□ -2
CCNFP41002 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCNFP41002 RNU2-52P-201ENST00000410680 190 ntBASIC2.54□□□□□ -2
CCNFP41002 SNRPGP14-201ENST00000435400 219 ntBASIC2.54□□□□□ -2
CCNFP41002 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.54□□□□□ -2
CCNFP41002 Y_RNA.651-201ENST00000459380 103 ntBASIC2.54□□□□□ -2
CCNFP41002 RNU6-781P-201ENST00000516377 101 ntBASIC2.54□□□□□ -2
CCNFP41002 SNORD36C-201ENST00000516733 66 ntBASIC2.54□□□□□ -2
CCNFP41002 RNU7-70P-201ENST00000516941 66 ntBASIC2.54□□□□□ -2
CCNFP41002 MIR4319-201ENST00000577285 85 ntBASIC2.54□□□□□ -2
CCNFP41002 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.54□□□□□ -2
CCNFP41002 MIR6715A-201ENST00000615929 79 ntBASIC2.54□□□□□ -2
CCNFP41002 MIR3914-2-201ENST00000637339 95 ntBASIC2.54□□□□□ -2
CCNFP41002 AC062016.1-201ENST00000355719 319 ntBASIC2.53□□□□□ -2
CCNFP41002 Y_RNA.37-201ENST00000362606 108 ntBASIC2.53□□□□□ -2
CCNFP41002 SNORD58C-201ENST00000365223 64 ntBASIC2.53□□□□□ -2
CCNFP41002 U8.16-201ENST00000391279 133 ntBASIC2.53□□□□□ -2
CCNFP41002 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
CCNFP41002 RPL23AP63-201ENST00000498752 471 ntBASIC2.53□□□□□ -2
CCNFP41002 RNU7-12P-201ENST00000516030 62 ntBASIC2.53□□□□□ -2
CCNFP41002 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
CCNFP41002 MIR5197-201ENST00000583721 112 ntBASIC2.53□□□□□ -2
CCNFP41002 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCNFP41002 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCNFP41002 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCNFP41002 Y_RNA.280-201ENST00000364765 112 ntBASIC2.52□□□□□ -2.01
CCNFP41002 Y_RNA.410-201ENST00000383992 113 ntBASIC2.52□□□□□ -2.01
CCNFP41002 Y_RNA.563-201ENST00000384707 108 ntBASIC2.52□□□□□ -2.01
CCNFP41002 SNORD23.1-201ENST00000408212 104 ntBASIC2.52□□□□□ -2.01
CCNFP41002 MIR1263-201ENST00000408324 86 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms