Protein–RNA interactions for Protein: P35609

ACTN2, Alpha-actinin-2, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2P35609 RNU6-1209P-201ENST00000363655 107 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 Y_RNA.393-201ENST00000383936 102 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 Y_RNA.419-201ENST00000384041 102 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 SNORD115-46-201ENST00000390982 71 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 MIR1252-201ENST00000408861 65 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 SNORA36B-201ENST00000410438 131 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 Y_RNA.631-201ENST00000459607 101 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.1□□□□□ -2.23
ACTN2P35609 RNU6-988P-201ENST00000519081 107 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 AC104695.3-201ENST00000604052 296 ntBASIC1.1□□□□□ -2.23
ACTN2P35609 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ACTN2P35609 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
ACTN2P35609 RNU4-90P-201ENST00000362773 141 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 RNU4-80P-201ENST00000363200 141 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 Y_RNA.128-201ENST00000363391 112 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 SNORD113-8-201ENST00000363497 74 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 RNU6-823P-201ENST00000391042 103 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 Y_RNA.645-201ENST00000391229 102 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 RNU6-101P-201ENST00000410323 104 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 RNU7-141P-201ENST00000459304 62 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 SNORD123-201ENST00000459473 70 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 AC010655.3-201ENST00000478818 450 ntBASIC1.09□□□□□ -2.23
ACTN2P35609 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.09□□□□□ -2.23
ACTN2P35609 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 Y_RNA.148-201ENST00000363557 117 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 RNU6-899P-201ENST00000363947 107 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 RNU6-801P-201ENST00000364087 105 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 Y_RNA.286-201ENST00000364813 102 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 Y_RNA.370-201ENST00000365589 108 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 RNU6-144P-201ENST00000383951 107 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 POLR2J4-204ENST00000418424 324 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 RNU6-191P-201ENST00000516295 94 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 RNU11-2P-201ENST00000516898 142 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 SNORA18.7-201ENST00000516910 131 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.08□□□□□ -2.24
ACTN2P35609 MIR5000-201ENST00000577717 103 ntBASIC1.08□□□□□ -2.24
ACTN2P35609 MIR802-201ENST00000390235 94 ntBASIC1.07□□□□□ -2.24
ACTN2P35609 RNU6-496P-201ENST00000516145 99 ntBASIC1.07□□□□□ -2.24
ACTN2P35609 RNU6-1046P-201ENST00000516538 107 ntBASIC1.07□□□□□ -2.24
ACTN2P35609 AC008507.4-201ENST00000585464 127 ntBASIC1.07□□□□□ -2.24
ACTN2P35609 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.07□□□□□ -2.24
ACTN2P35609 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 Y_RNA.31-201ENST00000362574 102 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 Y_RNA.276-201ENST00000364732 109 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 Y_RNA.418-201ENST00000384029 102 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 Y_RNA.581-201ENST00000391017 97 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 HSPE1P25-201ENST00000455484 251 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 NDUFA4P2-201ENST00000489989 244 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 RNU6-897P-201ENST00000517135 105 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 RN7SL793P-201ENST00000583259 296 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 SEPT14P17-201ENST00000617978 177 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 AC134503.1-201ENST00000633048 54 ntBASIC1.06□□□□□ -2.24
ACTN2P35609 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ACTN2P35609 RNU5E-4P-201ENST00000364931 120 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 RNU6-867P-201ENST00000364956 107 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 RNU1-36P-201ENST00000365130 165 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 Y_RNA.569-201ENST00000384749 103 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 RNU6-1067P-201ENST00000384752 107 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 RNU6-308P-201ENST00000390957 107 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 RNU7-41P-201ENST00000515917 61 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 AC005357.1-201ENST00000588399 301 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 RAC1P9-201ENST00000604990 392 ntBASIC1.05□□□□□ -2.24
ACTN2P35609 Y_RNA.389-201ENST00000383924 113 ntBASIC1.04□□□□□ -2.24
ACTN2P35609 RNU6-474P-201ENST00000384243 107 ntBASIC1.04□□□□□ -2.24
ACTN2P35609 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.04□□□□□ -2.24
ACTN2P35609 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
ACTN2P35609 AL020996.3-201ENST00000606617 222 ntBASIC1.04□□□□□ -2.24
ACTN2P35609 AC006441.5-201ENST00000612680 209 ntBASIC1.04□□□□□ -2.24
ACTN2P35609 Pinc.1-201ENST00000616452 154 ntBASIC1.04□□□□□ -2.24
ACTN2P35609 Y_RNA.61-201ENST00000362835 102 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 Y_RNA.813-201ENST00000364639 102 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 Y_RNA.535-201ENST00000384612 99 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 MIR216A-201ENST00000385063 110 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 SNORA26.5-201ENST00000391215 123 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 RNU2-14P-201ENST00000411053 191 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 SNORD11-201ENST00000459124 84 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
ACTN2P35609 PDCD5P2-201ENST00000507570 312 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 RNU6-1143P-201ENST00000516125 104 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 RNU6-764P-201ENST00000516396 105 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 RPL23AP91-201ENST00000569211 455 ntBASIC1.03□□□□□ -2.24
ACTN2P35609 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
ACTN2P35609 RNU6-268P-201ENST00000364174 107 ntBASIC1.02□□□□□ -2.25
ACTN2P35609 RNY1P4-201ENST00000384595 115 ntBASIC1.02□□□□□ -2.25
ACTN2P35609 MIR1185-1-201ENST00000408598 86 ntBASIC1.02□□□□□ -2.25
ACTN2P35609 Y_RNA.602-201ENST00000410535 92 ntBASIC1.02□□□□□ -2.25
ACTN2P35609 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.02□□□□□ -2.25
ACTN2P35609 AC023449.1-201ENST00000454464 154 ntBASIC1.02□□□□□ -2.25
ACTN2P35609 RN7SKP164-201ENST00000516138 266 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms