Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6-383P-201ENST00000410864 94 ntBASIC1.58□□□□□ -2.16
HOXC8P31273 AC245047.3-201ENST00000429428 127 ntBASIC1.58□□□□□ -2.16
HOXC8P31273 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXC8P31273 RPS27P1-201ENST00000450552 247 ntBASIC1.58□□□□□ -2.16
HOXC8P31273 AC079140.2-201ENST00000506193 142 ntBASIC1.58□□□□□ -2.16
HOXC8P31273 RNU6-138P-201ENST00000515952 107 ntBASIC1.58□□□□□ -2.16
HOXC8P31273 RNU6-794P-201ENST00000517261 64 ntBASIC1.58□□□□□ -2.16
HOXC8P31273 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXC8P31273 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HOXC8P31273 RNU6-923P-201ENST00000364753 107 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 SNORA25.9-201ENST00000365087 128 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 Y_RNA.572-201ENST00000384757 98 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 RNU6-493P-201ENST00000391321 108 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
HOXC8P31273 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 MIR1278-201ENST00000408753 81 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXC8P31273 RNU7-94P-201ENST00000459576 63 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.57□□□□□ -2.16
HOXC8P31273 RNU6-341P-201ENST00000516973 96 ntBASIC1.57□□□□□ -2.16
HOXC8P31273 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HOXC8P31273 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HOXC8P31273 SNORA1B-201ENST00000362535 133 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 RNU6-653P-201ENST00000363074 106 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 Y_RNA.262-201ENST00000364641 102 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 RNU6-200P-201ENST00000364743 107 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 Y_RNA.297-201ENST00000364950 91 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 SNORA4.2-201ENST00000365313 147 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 AC245517.4-201ENST00000448601 281 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 RNU6-437P-201ENST00000459408 95 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.56□□□□□ -2.16
HOXC8P31273 RNA5SP445-201ENST00000515889 115 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 AC100767.1-201ENST00000528178 123 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 Y_RNA.802-201ENST00000614892 130 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
HOXC8P31273 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HOXC8P31273 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HOXC8P31273 MIR411-201ENST00000362239 96 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 MIR367-201ENST00000362299 68 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 Y_RNA.24-201ENST00000362508 103 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 SNORD1A-201ENST00000364968 72 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 RNU6-53P-201ENST00000365367 106 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 RNU6-144P-201ENST00000383951 107 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 RNU6-1065P-201ENST00000384513 106 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 RN7SKP200-201ENST00000410564 320 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 MTND5P15-201ENST00000434246 349 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 COX6CP14-201ENST00000469580 174 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 RNU2-56P-201ENST00000516826 190 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC8P31273 MIR4724-201ENST00000579485 89 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 MIR3668-201ENST00000582138 75 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
HOXC8P31273 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
HOXC8P31273 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HOXC8P31273 Y_RNA.203-201ENST00000364106 102 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 RNU6-969P-201ENST00000383900 105 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 SNORA8.3-201ENST00000384679 139 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 AL161935.2-201ENST00000414627 60 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.54□□□□□ -2.16
HOXC8P31273 SNORA31.10-201ENST00000516482 106 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.54□□□□□ -2.16
HOXC8P31273 AP002004.2-201ENST00000531656 154 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 MIR8054-201ENST00000620877 86 ntBASIC1.54□□□□□ -2.16
HOXC8P31273 RNU4-41P-201ENST00000364426 143 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 RNU4-17P-201ENST00000365598 141 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 RNU6-47P-201ENST00000383866 107 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 MIR626-201ENST00000385032 94 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 RNU6-440P-201ENST00000390882 105 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 STAG3L5P-204ENST00000443759 179 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC8P31273 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXC8P31273 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 MIR4308-201ENST00000580634 81 ntBASIC1.53□□□□□ -2.16
HOXC8P31273 RNU6-674P-201ENST00000363831 107 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 snoU2_19.4-201ENST00000364329 80 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 Y_RNA.253-201ENST00000364562 112 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 Y_RNA.265-201ENST00000364677 108 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 RNU6-203P-201ENST00000384038 104 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 MIR562-201ENST00000384894 95 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 MIR526A2-201ENST00000390198 65 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 RNU6-907P-201ENST00000390924 102 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 MLLT10P1-201ENST00000418346 262 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 AC245047.8-201ENST00000456455 284 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 AC004223.1-201ENST00000479840 271 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 RPL23AP91-201ENST00000569211 455 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
HOXC8P31273 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HOXC8P31273 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HOXC8P31273 SNORD68-201ENST00000363214 84 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms