Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-907P-201ENST00000390924 102 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 MIR1298-201ENST00000408783 112 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 AL161935.2-201ENST00000414627 60 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.58□□□□□ -2.16
HOXA13P31271 AL049830.1-201ENST00000468034 425 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 AC022559.1-201ENST00000520905 205 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXA13P31271 MIR4308-201ENST00000580634 81 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 POLR3GP1-201ENST00000594073 261 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 SNORD3E-202ENST00000627253 216 ntBASIC1.58□□□□□ -2.16
HOXA13P31271 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HOXA13P31271 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 Y_RNA.308-201ENST00000365043 101 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 RNU6-493P-201ENST00000391321 108 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 SNORA36B-201ENST00000410438 131 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 AC108059.2-201ENST00000434626 151 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 PGBD4P5-201ENST00000445958 426 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 AC099513.1-201ENST00000490423 301 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 RPL23AP54-201ENST00000495129 419 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.57□□□□□ -2.16
HOXA13P31271 RNU4-71P-201ENST00000516258 113 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXA13P31271 AC011604.1-201ENST00000545978 196 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 AC073349.3-201ENST00000617616 186 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 AC141273.2-201ENST00000618989 130 ntBASIC1.57□□□□□ -2.16
HOXA13P31271 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 MIR411-201ENST00000362239 96 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 RNU6-1123P-201ENST00000362347 106 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 snoU2_19.4-201ENST00000364329 80 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 Y_RNA.293-201ENST00000364908 93 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 Y_RNA.304-201ENST00000365011 112 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 RNU6-1323P-201ENST00000384025 107 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 Y_RNA.552-201ENST00000384665 112 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 MT-TR-201ENST00000387439 65 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 RNU6-1248P-201ENST00000391096 64 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.56□□□□□ -2.16
HOXA13P31271 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA13P31271 TRMT112P2-201ENST00000512910 132 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA13P31271 MIR4781-201ENST00000585250 76 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 AL157834.3-201ENST00000615543 103 ntBASIC1.56□□□□□ -2.16
HOXA13P31271 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXA13P31271 RNU6-899P-201ENST00000363947 107 ntBASIC1.55□□□□□ -2.16
HOXA13P31271 Y_RNA.200-201ENST00000364018 102 ntBASIC1.55□□□□□ -2.16
HOXA13P31271 Y_RNA.297-201ENST00000364950 91 ntBASIC1.55□□□□□ -2.16
HOXA13P31271 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.55□□□□□ -2.16
HOXA13P31271 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
HOXA13P31271 RNU7-28P-201ENST00000516759 62 ntBASIC1.55□□□□□ -2.16
HOXA13P31271 MIR4778-201ENST00000577635 80 ntBASIC1.55□□□□□ -2.16
HOXA13P31271 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXA13P31271 AC106754.2-201ENST00000623006 233 ntBASIC1.55□□□□□ -2.16
HOXA13P31271 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.55□□□□□ -2.16
HOXA13P31271 Y_RNA.24-201ENST00000362508 103 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 SNORD33-201ENST00000362761 85 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 RNU6-1205P-201ENST00000363625 106 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 Y_RNA.199-201ENST00000364014 102 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 RNU6-969P-201ENST00000383900 105 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 SNORA72-201ENST00000384339 132 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 MIR194-1-201ENST00000384892 85 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 SCARNA8-201ENST00000515924 131 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 RNU6-453P-201ENST00000516819 85 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
HOXA13P31271 Y_RNA.83-201ENST00000363005 113 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 SNORD68-201ENST00000363214 84 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 RNU4-41P-201ENST00000364426 143 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 RNU6-1065P-201ENST00000384513 106 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 MT-TT-201ENST00000387460 66 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 RNA5SP482-201ENST00000391269 118 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 CALM2P4-201ENST00000430810 426 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 MTND5P15-201ENST00000434246 349 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXA13P31271 RNU1-123P-201ENST00000458950 160 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 RNU6-437P-201ENST00000459408 95 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 AC004223.1-201ENST00000479840 271 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 RNA5SP168-201ENST00000516642 112 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 RNU6-794P-201ENST00000517261 64 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 AC015688.6-201ENST00000577737 104 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 AL365434.2-201ENST00000607979 234 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 AL591926.4-201ENST00000616895 298 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 AL513423.1-201ENST00000621695 132 ntBASIC1.53□□□□□ -2.16
HOXA13P31271 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HOXA13P31271 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.52□□□□□ -2.17
HOXA13P31271 Y_RNA.253-201ENST00000364562 112 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 RNU6-200P-201ENST00000364743 107 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 Y_RNA.515-201ENST00000384535 112 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 RNU6-381P-201ENST00000391259 108 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 MLLT10P1-201ENST00000418346 262 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 SNX2P2-201ENST00000424553 323 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 Z98949.2-201ENST00000440996 144 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 AC245047.8-201ENST00000456455 284 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 RNU7-12P-201ENST00000516030 62 ntBASIC1.52□□□□□ -2.17
HOXA13P31271 RNU6-1116P-201ENST00000517269 99 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms