Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.99-201ENST00000363138 105 ntBASIC3.4□□□□□ -1.87
VARSP26640 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.4□□□□□ -1.87
VARSP26640 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.4□□□□□ -1.87
VARSP26640 MIR4513-201ENST00000581077 86 ntBASIC3.4□□□□□ -1.87
VARSP26640 AC096720.1-201ENST00000604441 183 ntBASIC3.4□□□□□ -1.87
VARSP26640 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
VARSP26640 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
VARSP26640 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VARSP26640 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VARSP26640 RNU6-1072P-201ENST00000384703 107 ntBASIC3.39□□□□□ -1.87
VARSP26640 RNU6-443P-201ENST00000384780 107 ntBASIC3.39□□□□□ -1.87
VARSP26640 RN7SKP220-201ENST00000410611 288 ntBASIC3.39□□□□□ -1.87
VARSP26640 AC073261.1-201ENST00000429409 121 ntBASIC3.39□□□□□ -1.87
VARSP26640 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.39□□□□□ -1.87
VARSP26640 STAG3L5P-204ENST00000443759 179 ntBASIC3.39□□□□□ -1.87
VARSP26640 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
VARSP26640 RNU7-181P-201ENST00000517234 74 ntBASIC3.39□□□□□ -1.87
VARSP26640 MIR548AE2-201ENST00000583456 67 ntBASIC3.39□□□□□ -1.87
VARSP26640 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
VARSP26640 MIR3651-201ENST00000630427 90 ntBASIC3.39□□□□□ -1.87
VARSP26640 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VARSP26640 SNORD116-10-201ENST00000363791 102 ntBASIC3.38□□□□□ -1.87
VARSP26640 RNU6-652P-201ENST00000365488 107 ntBASIC3.38□□□□□ -1.87
VARSP26640 RNU6-424P-201ENST00000384367 105 ntBASIC3.38□□□□□ -1.87
VARSP26640 RNU6-160P-201ENST00000384591 107 ntBASIC3.38□□□□□ -1.87
VARSP26640 RNA5SP109-201ENST00000391010 116 ntBASIC3.38□□□□□ -1.87
VARSP26640 MIR1267-201ENST00000408723 78 ntBASIC3.38□□□□□ -1.87
VARSP26640 AC069257.2-201ENST00000441819 155 ntBASIC3.38□□□□□ -1.87
VARSP26640 SNORA59A-201ENST00000459326 152 ntBASIC3.38□□□□□ -1.87
VARSP26640 RNA5SP33-201ENST00000516687 98 ntBASIC3.38□□□□□ -1.87
VARSP26640 RN7SKP57-201ENST00000517248 293 ntBASIC3.38□□□□□ -1.87
VARSP26640 IGLV3-17-201ENST00000519099 244 ntBASIC3.38□□□□□ -1.87
VARSP26640 ELOCP29-201ENST00000588193 334 ntBASIC3.38□□□□□ -1.87
VARSP26640 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.38□□□□□ -1.87
VARSP26640 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VARSP26640 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VARSP26640 Y_RNA.4-201ENST00000362333 112 ntBASIC3.37□□□□□ -1.87
VARSP26640 Y_RNA.191-201ENST00000363972 113 ntBASIC3.37□□□□□ -1.87
VARSP26640 RNU6-776P-201ENST00000364403 104 ntBASIC3.37□□□□□ -1.87
VARSP26640 RNU6-1022P-201ENST00000365049 104 ntBASIC3.37□□□□□ -1.87
VARSP26640 SNORD58A-201ENST00000383875 65 ntBASIC3.37□□□□□ -1.87
VARSP26640 Y_RNA.470-201ENST00000384307 117 ntBASIC3.37□□□□□ -1.87
VARSP26640 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.37□□□□□ -1.87
VARSP26640 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.37□□□□□ -1.87
VARSP26640 Z96811.1-201ENST00000445880 108 ntBASIC3.37□□□□□ -1.87
VARSP26640 UBL5P3-201ENST00000475112 231 ntBASIC3.37□□□□□ -1.87
VARSP26640 SNORA70.19-201ENST00000516717 90 ntBASIC3.37□□□□□ -1.87
VARSP26640 AC007536.1-201ENST00000533382 349 ntBASIC3.37□□□□□ -1.87
VARSP26640 AC006160.2-201ENST00000637708 154 ntBASIC3.37□□□□□ -1.87
VARSP26640 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
VARSP26640 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
VARSP26640 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
VARSP26640 SNORD115-2-201ENST00000362842 82 ntBASIC3.36□□□□□ -1.87
VARSP26640 RNU1-33P-201ENST00000364249 162 ntBASIC3.36□□□□□ -1.87
VARSP26640 SNORD115-20-201ENST00000365099 82 ntBASIC3.36□□□□□ -1.87
VARSP26640 RNU6-1319P-201ENST00000390855 104 ntBASIC3.36□□□□□ -1.87
VARSP26640 RNU6-747P-201ENST00000390928 104 ntBASIC3.36□□□□□ -1.87
VARSP26640 U8.15-201ENST00000390947 134 ntBASIC3.36□□□□□ -1.87
VARSP26640 RNU6-241P-201ENST00000391148 104 ntBASIC3.36□□□□□ -1.87
VARSP26640 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.36□□□□□ -1.87
VARSP26640 RNU6-177P-201ENST00000411257 104 ntBASIC3.36□□□□□ -1.87
VARSP26640 AC015922.2-201ENST00000435593 184 ntBASIC3.36□□□□□ -1.87
VARSP26640 MIR1270-201ENST00000459320 83 ntBASIC3.36□□□□□ -1.87
VARSP26640 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
VARSP26640 MIR3152-201ENST00000579801 74 ntBASIC3.36□□□□□ -1.87
VARSP26640 MIR3922-201ENST00000585192 84 ntBASIC3.36□□□□□ -1.87
VARSP26640 AC103810.6-201ENST00000606708 136 ntBASIC3.36□□□□□ -1.87
VARSP26640 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
VARSP26640 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.35□□□□□ -1.87
VARSP26640 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.35□□□□□ -1.87
VARSP26640 SNORA1.1-201ENST00000364671 133 ntBASIC3.35□□□□□ -1.87
VARSP26640 RNA5SP120-201ENST00000410900 112 ntBASIC3.35□□□□□ -1.87
VARSP26640 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.35□□□□□ -1.87
VARSP26640 AC025518.1-201ENST00000479856 347 ntBASIC3.35□□□□□ -1.87
VARSP26640 RNA5SP385-201ENST00000515947 110 ntBASIC3.35□□□□□ -1.87
VARSP26640 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
VARSP26640 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
VARSP26640 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
VARSP26640 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VARSP26640 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
VARSP26640 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VARSP26640 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VARSP26640 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.87
VARSP26640 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
VARSP26640 RNU6-1313P-201ENST00000362622 102 ntBASIC3.34□□□□□ -1.87
VARSP26640 SNORA22.1-201ENST00000362701 134 ntBASIC3.34□□□□□ -1.87
VARSP26640 SNORA25B-201ENST00000365507 128 ntBASIC3.34□□□□□ -1.87
VARSP26640 RN7SKP192-201ENST00000411291 327 ntBASIC3.34□□□□□ -1.87
VARSP26640 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.34□□□□□ -1.87
VARSP26640 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.34□□□□□ -1.87
VARSP26640 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
VARSP26640 AC108729.3-201ENST00000513484 108 ntBASIC3.34□□□□□ -1.87
VARSP26640 MIR4439-201ENST00000583746 80 ntBASIC3.34□□□□□ -1.87
VARSP26640 MIR3616-201ENST00000584070 92 ntBASIC3.34□□□□□ -1.87
VARSP26640 MIR376B-201ENST00000614515 100 ntBASIC3.34□□□□□ -1.87
VARSP26640 MIR548BB-201ENST00000626714 66 ntBASIC3.34□□□□□ -1.87
VARSP26640 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VARSP26640 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VARSP26640 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VARSP26640 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms