Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 RNA5SP432-201ENST00000362480 116 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 SNORD115-28-201ENST00000363931 81 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 MIR520A-201ENST00000384862 85 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
ATP2B4P23634 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 RNA5SP425-201ENST00000410336 112 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 HSPE1P9-201ENST00000440046 311 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 AC114811.1-201ENST00000507207 168 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 AC234781.5-201ENST00000508429 271 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 U6.95-201ENST00000636931 70 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
ATP2B4P23634 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATP2B4P23634 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ATP2B4P23634 RNA5SP456-201ENST00000364002 114 ntBASIC3.02□□□□□ -1.93
ATP2B4P23634 RNU6-1189P-201ENST00000383958 107 ntBASIC3.02□□□□□ -1.93
ATP2B4P23634 Y_RNA.547-201ENST00000384654 119 ntBASIC3.02□□□□□ -1.93
ATP2B4P23634 RNU6-1064P-201ENST00000410626 104 ntBASIC3.02□□□□□ -1.93
ATP2B4P23634 RNU2-7P-201ENST00000410794 178 ntBASIC3.02□□□□□ -1.93
ATP2B4P23634 snoU13.26-201ENST00000459452 105 ntBASIC3.02□□□□□ -1.93
ATP2B4P23634 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.02□□□□□ -1.93
ATP2B4P23634 AL161431.1-201ENST00000618966 4205 ntBASIC3.02□□□□□ -1.93
ATP2B4P23634 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATP2B4P23634 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
ATP2B4P23634 RNU6-508P-201ENST00000363231 103 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 SNORD114-30-201ENST00000364448 72 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 RNU6-1325P-201ENST00000364905 105 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 SNORD38C-201ENST00000384381 69 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 MIR181B1-201ENST00000385240 110 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 RNA5SP210-201ENST00000391034 120 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 AL445646.1-201ENST00000431784 216 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 Y_RNA.651-201ENST00000459380 103 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 snoU13.15-201ENST00000459407 104 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 UBL5P3-201ENST00000475112 231 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.01□□□□□ -1.93
ATP2B4P23634 SNORD14A-201ENST00000606526 91 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 AC015726.2-201ENST00000620112 122 ntBASIC3.01□□□□□ -1.93
ATP2B4P23634 AC016717.2-201ENST00000609089 5141 ntBASIC3□□□□□ -1.93
ATP2B4P23634 MIRLET7C-201ENST00000362160 84 ntBASIC3□□□□□ -1.93
ATP2B4P23634 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
ATP2B4P23634 AL590004.2-201ENST00000404787 371 ntBASIC3□□□□□ -1.93
ATP2B4P23634 RN7SKP223-201ENST00000410582 62 ntBASIC3□□□□□ -1.93
ATP2B4P23634 Y_RNA.617-201ENST00000410920 90 ntBASIC3□□□□□ -1.93
ATP2B4P23634 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3□□□□□ -1.93
ATP2B4P23634 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3□□□□□ -1.93
ATP2B4P23634 AL021397.1-201ENST00000451806 248 ntBASIC3□□□□□ -1.93
ATP2B4P23634 RNU6-113P-201ENST00000516653 101 ntBASIC3□□□□□ -1.93
ATP2B4P23634 RNU6-919P-201ENST00000516731 104 ntBASIC3□□□□□ -1.93
ATP2B4P23634 SCARNA15-202ENST00000516881 127 ntBASIC3□□□□□ -1.93
ATP2B4P23634 AC004486.1-201ENST00000546846 233 ntBASIC3□□□□□ -1.93
ATP2B4P23634 SUB1P4-201ENST00000566062 339 ntBASIC3□□□□□ -1.93
ATP2B4P23634 MIR5092-201ENST00000583139 88 ntBASIC3□□□□□ -1.93
ATP2B4P23634 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3□□□□□ -1.93
ATP2B4P23634 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
ATP2B4P23634 ICE2P2-201ENST00000483823 2787 ntBASIC3□□□□□ -1.93
ATP2B4P23634 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.99□□□□□ -1.93
ATP2B4P23634 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
ATP2B4P23634 Y_RNA.37-201ENST00000362606 108 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 SNORD58C-201ENST00000365223 64 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 RNU1-51P-201ENST00000365345 176 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 RNU6-476P-201ENST00000384726 107 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 RNA5SP501-201ENST00000410990 112 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 RNA5SP344-201ENST00000411081 104 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 AL356320.1-201ENST00000429616 163 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 RNU6-1116P-201ENST00000517269 99 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 MIR4648-201ENST00000580107 72 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 AC103810.6-201ENST00000606708 136 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 U1.36-201ENST00000620684 176 ntBASIC2.99□□□□□ -1.93
ATP2B4P23634 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2B4P23634 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
ATP2B4P23634 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2B4P23634 SNORA2.2-201ENST00000365473 135 ntBASIC2.98□□□□□ -1.93
ATP2B4P23634 AC007064.1-201ENST00000412238 351 ntBASIC2.98□□□□□ -1.93
ATP2B4P23634 CALM2P4-201ENST00000430810 426 ntBASIC2.98□□□□□ -1.93
ATP2B4P23634 AC046143.2-201ENST00000609789 160 ntBASIC2.98□□□□□ -1.93
ATP2B4P23634 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
ATP2B4P23634 SNORA4.2-201ENST00000365313 147 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 RNU6-1144P-201ENST00000384247 104 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 RNU6-424P-201ENST00000384367 105 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 RNU6-1031P-201ENST00000384773 107 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 SNORA40.5-201ENST00000391061 128 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 AL035461.1-201ENST00000421490 332 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.97□□□□□ -1.93
ATP2B4P23634 AC087499.4-201ENST00000448505 178 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 RPL23AP63-201ENST00000498752 471 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 RNA5SP481-201ENST00000516814 122 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 MIR1291-201ENST00000627649 87 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 MIR376A2-201ENST00000636782 80 ntBASIC2.97□□□□□ -1.93
ATP2B4P23634 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ATP2B4P23634 VTRNA1-1-201ENST00000363120 99 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 U8.16-201ENST00000391279 133 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 RN7SKP19-201ENST00000516016 252 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 RNA5SP281-201ENST00000516504 135 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 RNA5SP168-201ENST00000516642 112 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 RNU7-70P-201ENST00000516941 66 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 MTND5P34-201ENST00000568888 325 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 MIR7843-201ENST00000622274 79 ntBASIC2.96□□□□□ -1.94
ATP2B4P23634 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.96□□□□□ -1.94
ATP2B4P23634 RNU6-833P-201ENST00000363486 107 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms