Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.49□□□□□ -2.49
FREM3P0C091 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.49□□□□□ -2.49
FREM3P0C091 MIR4676-201ENST00000583078 72 ntBASIC-0.49□□□□□ -2.49
FREM3P0C091 AL355297.3-201ENST00000604082 446 ntBASIC-0.49□□□□□ -2.49
FREM3P0C091 AC134878.1-201ENST00000619901 243 ntBASIC-0.49□□□□□ -2.49
FREM3P0C091 SNORD14E-201ENST00000364009 85 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 SNORD75.1-201ENST00000408373 60 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MTCO2P8-201ENST00000412213 658 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.5□□□□□ -2.49
FREM3P0C091 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MTND3P16-201ENST00000452205 344 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC091951.2-201ENST00000500762 203 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.5□□□□□ -2.49
FREM3P0C091 RNU6-436P-201ENST00000516171 114 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 RNU6-180P-201ENST00000516697 61 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC131281.1-201ENST00000522984 164 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MIR3681-201ENST00000580089 72 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC121247.2-201ENST00000604776 136 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC020891.4-201ENST00000605745 93 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 RNU6-254P-201ENST00000363377 107 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MIR196A2-201ENST00000385189 110 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MIR516B1-201ENST00000385211 90 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.5□□□□□ -2.49
FREM3P0C091 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.5□□□□□ -2.49
FREM3P0C091 AC069271.1-201ENST00000445577 156 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 RNU6-329P-201ENST00000459618 107 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MTND3P7-201ENST00000474435 343 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.5□□□□□ -2.49
FREM3P0C091 SNORA25.10-201ENST00000515926 124 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC006157.1-201ENST00000611750 366 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 RN7SL660P-201ENST00000614852 299 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MTND1P7-201ENST00000632801 297 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 AC091304.10-201ENST00000641554 121 ntBASIC-0.5□□□□□ -2.49
FREM3P0C091 MTND1P17-201ENST00000448961 204 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 RNU7-25P-201ENST00000516544 62 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 MTND1P24-201ENST00000552175 861 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 MIR5188-201ENST00000583467 113 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 AC019193.3-201ENST00000609144 554 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 MIR8055-201ENST00000610739 97 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 AL354950.2-201ENST00000617939 290 ntBASIC-0.51□□□□□ -2.49
FREM3P0C091 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 RNY3P10-201ENST00000384764 102 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 MIR215-201ENST00000384858 110 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
FREM3P0C091 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.52□□□□□ -2.49
FREM3P0C091 RNA5SP401-201ENST00000515920 127 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 RNU7-149P-201ENST00000516739 59 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.52□□□□□ -2.49
FREM3P0C091 AC087685.1-201ENST00000587507 141 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 AC068137.3-201ENST00000639191 341 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 SNORD113-6-201ENST00000363345 75 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 MIR620-201ENST00000385232 95 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 AL138752.1-201ENST00000452964 351 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.52□□□□□ -2.49
FREM3P0C091 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.52□□□□□ -2.49
FREM3P0C091 MIR3925-201ENST00000584674 77 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 AC124303.1-201ENST00000605703 360 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 AC063944.3-201ENST00000609969 533 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 uc_338.36-201ENST00000622331 158 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 MIR4788-201ENST00000639104 80 ntBASIC-0.52□□□□□ -2.49
FREM3P0C091 RNU6-702P-201ENST00000364982 107 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 RNU6-437P-201ENST00000459408 95 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.53□□□□□ -2.49
FREM3P0C091 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.53□□□□□ -2.49
FREM3P0C091 RNU2-13P-201ENST00000515909 113 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 RNY1P9-201ENST00000532431 109 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 AC087752.4-201ENST00000605911 462 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 Z97988.1-201ENST00000637697 135 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.53□□□□□ -2.49
FREM3P0C091 SNORD114-14-201ENST00000362723 75 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.53□□□□□ -2.49
FREM3P0C091 AC022441.3-201ENST00000605737 136 ntBASIC-0.53□□□□□ -2.49
FREM3P0C091 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.54□□□□□ -2.5
FREM3P0C091 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.54□□□□□ -2.5
FREM3P0C091 MTND4P19-201ENST00000446659 478 ntBASIC-0.54□□□□□ -2.5
FREM3P0C091 RPL30P15-201ENST00000457129 321 ntBASIC-0.54□□□□□ -2.5
FREM3P0C091 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.54□□□□□ -2.5
FREM3P0C091 LRRC34P1-201ENST00000542742 915 ntBASIC-0.54□□□□□ -2.5
FREM3P0C091 AC106754.1-201ENST00000562632 1513 ntBASIC-0.54□□□□□ -2.5
FREM3P0C091 RNU6-595P-201ENST00000363944 107 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNRPGP10-201ENST00000432323 225 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 AC087499.4-201ENST00000448505 178 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 AP003357.1-201ENST00000604497 148 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms