Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MLLT10P1-201ENST00000418346 262 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 AL049830.1-201ENST00000468034 425 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 SNORD77.4-201ENST00000516158 81 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 RNU6-1299P-201ENST00000516316 100 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 RNU7-149P-201ENST00000516739 59 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 RNU2-56P-201ENST00000516826 190 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.24□□□□□ -2.05
SNRPA1P09661 AP002004.2-201ENST00000531656 154 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 AC084364.2-201ENST00000546924 395 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 AL591926.4-201ENST00000616895 298 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 U2.22-201ENST00000636441 106 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 MIR126-201ENST00000362291 85 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 RNU6-704P-201ENST00000364162 103 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 RNU6-768P-201ENST00000384683 107 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 SNORA19-201ENST00000384737 128 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 SNORA79-201ENST00000408376 140 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 AC245047.3-201ENST00000429428 127 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 RPS27P1-201ENST00000450552 247 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 RNU6-426P-201ENST00000516464 97 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 AL358944.1-201ENST00000528537 144 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.23□□□□□ -2.05
SNRPA1P09661 AC069114.2-201ENST00000604699 304 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 Pinc.1-201ENST00000616452 154 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
SNRPA1P09661 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SNRPA1P09661 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNRPA1P09661 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
SNRPA1P09661 AC008555.8-201ENST00000623602 2168 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 Y_RNA.91-201ENST00000363042 107 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 Y_RNA.338-201ENST00000365320 114 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 SNORD37.2-201ENST00000391075 66 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.22□□□□□ -2.05
SNRPA1P09661 AL356379.1-201ENST00000414105 126 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 AC245047.4-201ENST00000433189 144 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 TMSB4XP3-201ENST00000445144 114 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.22□□□□□ -2.05
SNRPA1P09661 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 SNORA25.12-201ENST00000516202 82 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 RNVU1-2-201ENST00000516326 135 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 RNU6-197P-201ENST00000516680 100 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 MIR502-201ENST00000606349 86 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.22□□□□□ -2.05
SNRPA1P09661 SNORD68-201ENST00000363214 84 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 Y_RNA.343-201ENST00000365354 112 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNRPA1P09661 MIR569-201ENST00000385228 96 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 SNORA67.5-201ENST00000391036 107 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 RNA5SP465-201ENST00000391195 109 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 RNU2-70P-201ENST00000410718 179 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 RNU2-55P-201ENST00000411146 174 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.21□□□□□ -2.06
SNRPA1P09661 OR9P1P-201ENST00000496431 281 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 MIR4419B-201ENST00000577260 68 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 MIR4498-201ENST00000577599 66 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 MIR378D2-201ENST00000580636 98 ntBASIC2.21□□□□□ -2.06
SNRPA1P09661 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SNRPA1P09661 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRPA1P09661 RNU6-661P-201ENST00000362409 107 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 RNU6-199P-201ENST00000362954 107 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 RNU6-1019P-201ENST00000364424 107 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 Y_RNA.634-201ENST00000364811 113 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 RNU6-1336P-201ENST00000383886 109 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 Y_RNA.393-201ENST00000383936 102 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 Y_RNA.486-201ENST00000384398 107 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 Y_RNA.497-201ENST00000384447 98 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 SNORD72-201ENST00000390994 80 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNRPA1P09661 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRPA1P09661 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRPA1P09661 MRPS17P9-201ENST00000511924 393 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRPA1P09661 MIR548X2-201ENST00000579776 100 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 AC120024.3-201ENST00000603167 156 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRPA1P09661 MIR6844-201ENST00000637122 62 ntBASIC2.2□□□□□ -2.06
SNRPA1P09661 RNU6-1138P-201ENST00000365359 106 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 SNORD50.2-201ENST00000365465 70 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 Y_RNA.568-201ENST00000384742 113 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 MIR522-201ENST00000385071 87 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 AC112693.2-201ENST00000556538 232 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 AP001485.1-201ENST00000604799 199 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 AC132825.6-201ENST00000638861 357 ntBASIC2.19□□□□□ -2.06
SNRPA1P09661 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SNRPA1P09661 Y_RNA.265-201ENST00000364677 108 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 SNORA20-201ENST00000384662 132 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 MIR513C-201ENST00000401352 84 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 RNU6-588P-201ENST00000410281 105 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 RNA5SP501-201ENST00000410990 112 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 STAG3L5P-204ENST00000443759 179 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
SNRPA1P09661 MIR8054-201ENST00000620877 86 ntBASIC2.18□□□□□ -2.06
SNRPA1P09661 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNRPA1P09661 MIR378A-201ENST00000362177 66 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 RNY1P11-201ENST00000363759 113 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 RNU6-978P-201ENST00000364371 103 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 RNU6-1082P-201ENST00000364574 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms