Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
RETP07949 Y_RNA.11-201ENST00000362375 109 ntBASIC0.84□□□□□ -2.27
RETP07949 SNORD113-8-201ENST00000363497 74 ntBASIC0.84□□□□□ -2.27
RETP07949 Y_RNA.202-201ENST00000364083 110 ntBASIC0.84□□□□□ -2.27
RETP07949 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
RETP07949 Y_RNA.455-201ENST00000384230 98 ntBASIC0.84□□□□□ -2.27
RETP07949 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
RETP07949 SNORD41-201ENST00000386967 70 ntBASIC0.84□□□□□ -2.27
RETP07949 MIR891A-201ENST00000401237 79 ntBASIC0.84□□□□□ -2.27
RETP07949 AC104332.1-201ENST00000440471 797 ntBASIC0.84□□□□□ -2.27
RETP07949 CYCTP-201ENST00000504253 315 ntBASIC0.84□□□□□ -2.27
RETP07949 Y_RNA.701-201ENST00000516812 110 ntBASIC0.84□□□□□ -2.27
RETP07949 SNORA70.22-201ENST00000517160 124 ntBASIC0.84□□□□□ -2.27
RETP07949 AC090049.2-201ENST00000550377 109 ntBASIC0.84□□□□□ -2.27
RETP07949 MIR4762-201ENST00000585261 75 ntBASIC0.84□□□□□ -2.27
RETP07949 POLR3GP1-201ENST00000594073 261 ntBASIC0.84□□□□□ -2.27
RETP07949 AC120024.3-201ENST00000603167 156 ntBASIC0.84□□□□□ -2.27
RETP07949 AC027279.3-201ENST00000625055 122 ntBASIC0.84□□□□□ -2.27
RETP07949 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
RETP07949 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
RETP07949 RNU4-80P-201ENST00000363200 141 ntBASIC0.83□□□□□ -2.28
RETP07949 RNU6-833P-201ENST00000363486 107 ntBASIC0.83□□□□□ -2.28
RETP07949 Y_RNA.222-201ENST00000364264 102 ntBASIC0.83□□□□□ -2.28
RETP07949 Y_RNA.253-201ENST00000364562 112 ntBASIC0.83□□□□□ -2.28
RETP07949 SNORA2.2-201ENST00000365473 135 ntBASIC0.83□□□□□ -2.28
RETP07949 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
RETP07949 RNU6-163P-201ENST00000384396 106 ntBASIC0.83□□□□□ -2.28
RETP07949 RNU6-1248P-201ENST00000391096 64 ntBASIC0.83□□□□□ -2.28
RETP07949 Y_RNA.602-201ENST00000410535 92 ntBASIC0.83□□□□□ -2.28
RETP07949 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
RETP07949 PIGPP3-201ENST00000425307 415 ntBASIC0.83□□□□□ -2.28
RETP07949 AC114811.1-201ENST00000507207 168 ntBASIC0.83□□□□□ -2.28
RETP07949 RNU6-322P-201ENST00000516010 103 ntBASIC0.83□□□□□ -2.28
RETP07949 RNU6-496P-201ENST00000516145 99 ntBASIC0.83□□□□□ -2.28
RETP07949 RNA5SP121-201ENST00000516537 101 ntBASIC0.83□□□□□ -2.28
RETP07949 SNORA40.15-201ENST00000516884 107 ntBASIC0.83□□□□□ -2.28
RETP07949 AC136628.3-201ENST00000521868 290 ntBASIC0.83□□□□□ -2.28
RETP07949 MIR4680-201ENST00000580906 66 ntBASIC0.83□□□□□ -2.28
RETP07949 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
RETP07949 AL356055.1-201ENST00000602528 446 ntBASIC0.83□□□□□ -2.28
RETP07949 AL355297.3-201ENST00000604082 446 ntBASIC0.83□□□□□ -2.28
RETP07949 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
RETP07949 AP003357.1-201ENST00000604497 148 ntBASIC0.83□□□□□ -2.28
RETP07949 RNU4-90P-201ENST00000362773 141 ntBASIC0.82□□□□□ -2.28
RETP07949 RNA5SP257-201ENST00000363023 116 ntBASIC0.82□□□□□ -2.28
RETP07949 Y_RNA.258-201ENST00000364613 105 ntBASIC0.82□□□□□ -2.28
RETP07949 U8.7-201ENST00000364940 136 ntBASIC0.82□□□□□ -2.28
RETP07949 RNU6-102P-201ENST00000384485 104 ntBASIC0.82□□□□□ -2.28
RETP07949 Y_RNA.527-201ENST00000384573 102 ntBASIC0.82□□□□□ -2.28
RETP07949 MIR522-201ENST00000385071 87 ntBASIC0.82□□□□□ -2.28
RETP07949 AL451046.2-201ENST00000403074 277 ntBASIC0.82□□□□□ -2.28
RETP07949 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.82□□□□□ -2.28
RETP07949 MLLT10P1-201ENST00000418346 262 ntBASIC0.82□□□□□ -2.28
RETP07949 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.82□□□□□ -2.28
RETP07949 MTCYBP6-201ENST00000441810 138 ntBASIC0.82□□□□□ -2.28
RETP07949 AC117454.1-201ENST00000491120 168 ntBASIC0.82□□□□□ -2.28
RETP07949 RNU7-115P-201ENST00000516433 55 ntBASIC0.82□□□□□ -2.28
RETP07949 AC024405.2-202ENST00000532731 184 ntBASIC0.82□□□□□ -2.28
RETP07949 AC113195.1-201ENST00000579952 141 ntBASIC0.82□□□□□ -2.28
RETP07949 GHRLOS.1-201ENST00000610995 70 ntBASIC0.82□□□□□ -2.28
RETP07949 Y_RNA.105-201ENST00000363182 111 ntBASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.136-201ENST00000363444 102 ntBASIC0.81□□□□□ -2.28
RETP07949 RNU6-770P-201ENST00000363929 105 ntBASIC0.81□□□□□ -2.28
RETP07949 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.214-201ENST00000364201 112 ntBASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.276-201ENST00000364732 109 ntBASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.418-201ENST00000384029 102 ntBASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.569-201ENST00000384749 103 ntBASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.581-201ENST00000391017 97 ntBASIC0.81□□□□□ -2.28
RETP07949 RNU6-121P-201ENST00000410525 99 ntBASIC0.81□□□□□ -2.28
RETP07949 RNU6-1054P-201ENST00000411293 104 ntBASIC0.81□□□□□ -2.28
RETP07949 ELOCP20-201ENST00000422460 345 ntBASIC0.81□□□□□ -2.28
RETP07949 HSPE1P25-201ENST00000455484 251 ntBASIC0.81□□□□□ -2.28
RETP07949 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
RETP07949 RPL23AP54-201ENST00000495129 419 ntBASIC0.81□□□□□ -2.28
RETP07949 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
RETP07949 RNU6-191P-201ENST00000516295 94 ntBASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.714-201ENST00000517065 90 ntBASIC0.81□□□□□ -2.28
RETP07949 AC131281.1-201ENST00000522984 164 ntBASIC0.81□□□□□ -2.28
RETP07949 DEFB108E-201ENST00000524692 240 ntBASIC0.81□□□□□ -2.28
RETP07949 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.81□□□□□ -2.28
RETP07949 AC127455.1-201ENST00000565496 145 ntBASIC0.81□□□□□ -2.28
RETP07949 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.81□□□□□ -2.28
RETP07949 AC044792.1-201ENST00000593294 196 ntBASIC0.81□□□□□ -2.28
RETP07949 MIR8087-201ENST00000612745 78 ntBASIC0.81□□□□□ -2.28
RETP07949 MIR548AY-201ENST00000617669 107 ntBASIC0.81□□□□□ -2.28
RETP07949 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
RETP07949 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.81□□□□□ -2.28
RETP07949 Y_RNA.19-201ENST00000362462 99 ntBASIC0.8□□□□□ -2.28
RETP07949 RNU6-1084P-201ENST00000362498 107 ntBASIC0.8□□□□□ -2.28
RETP07949 Y_RNA.152-201ENST00000363578 100 ntBASIC0.8□□□□□ -2.28
RETP07949 RNU6-801P-201ENST00000364087 105 ntBASIC0.8□□□□□ -2.28
RETP07949 Y_RNA.203-201ENST00000364106 102 ntBASIC0.8□□□□□ -2.28
RETP07949 Y_RNA.210-201ENST00000364161 110 ntBASIC0.8□□□□□ -2.28
RETP07949 SNORA33.2-201ENST00000365413 134 ntBASIC0.8□□□□□ -2.28
RETP07949 RNU6-1227P-201ENST00000383981 107 ntBASIC0.8□□□□□ -2.28
RETP07949 SNORA72.4-201ENST00000384174 132 ntBASIC0.8□□□□□ -2.28
RETP07949 MIR19B1-201ENST00000384829 87 ntBASIC0.8□□□□□ -2.28
RETP07949 MIR526A1-201ENST00000384897 85 ntBASIC0.8□□□□□ -2.28
RETP07949 MIR452-201ENST00000385020 85 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms