Protein–RNA interactions for Protein: P06401

PGR, Progesterone receptor, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGRP06401 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
PGRP06401 MIR449A-201ENST00000362113 91 ntBASIC2.65□□□□□ -1.99
PGRP06401 MIRLET7C-201ENST00000362160 84 ntBASIC2.65□□□□□ -1.99
PGRP06401 Y_RNA.366-201ENST00000365540 102 ntBASIC2.65□□□□□ -1.99
PGRP06401 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PGRP06401 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
PGRP06401 AC114811.1-201ENST00000507207 168 ntBASIC2.65□□□□□ -1.99
PGRP06401 MIR3162-201ENST00000581818 82 ntBASIC2.65□□□□□ -1.99
PGRP06401 AL137067.1-201ENST00000615933 120 ntBASIC2.65□□□□□ -1.99
PGRP06401 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PGRP06401 RNU6-163P-201ENST00000384396 106 ntBASIC2.64□□□□□ -1.99
PGRP06401 RNU6-880P-201ENST00000384526 107 ntBASIC2.64□□□□□ -1.99
PGRP06401 Y_RNA.528-201ENST00000384575 108 ntBASIC2.64□□□□□ -1.99
PGRP06401 RNA5SP136-201ENST00000410906 107 ntBASIC2.64□□□□□ -1.99
PGRP06401 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.64□□□□□ -1.99
PGRP06401 RPS26P48-201ENST00000491713 339 ntBASIC2.64□□□□□ -1.99
PGRP06401 SNORD36C-201ENST00000516733 66 ntBASIC2.64□□□□□ -1.99
PGRP06401 RNU6-1116P-201ENST00000517269 99 ntBASIC2.64□□□□□ -1.99
PGRP06401 MIR4529-201ENST00000578110 78 ntBASIC2.64□□□□□ -1.99
PGRP06401 AL033523.1-201ENST00000605153 153 ntBASIC2.64□□□□□ -1.99
PGRP06401 AC015726.2-201ENST00000620112 122 ntBASIC2.64□□□□□ -1.99
PGRP06401 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PGRP06401 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PGRP06401 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PGRP06401 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PGRP06401 RNA5SP432-201ENST00000362480 116 ntBASIC2.63□□□□□ -1.99
PGRP06401 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
PGRP06401 RNU6-938P-201ENST00000411285 103 ntBASIC2.63□□□□□ -1.99
PGRP06401 HMGN2P3-201ENST00000433603 273 ntBASIC2.63□□□□□ -1.99
PGRP06401 HMGN2P5-201ENST00000436882 273 ntBASIC2.63□□□□□ -1.99
PGRP06401 HSPE1P9-201ENST00000440046 311 ntBASIC2.63□□□□□ -1.99
PGRP06401 AC027279.3-201ENST00000625055 122 ntBASIC2.63□□□□□ -1.99
PGRP06401 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PGRP06401 ICE2P2-201ENST00000483823 2787 ntBASIC2.62□□□□□ -1.99
PGRP06401 ZNF720P1-201ENST00000562403 1939 ntBASIC2.62□□□□□ -1.99
PGRP06401 SNORA63D-201ENST00000364359 132 ntBASIC2.62□□□□□ -1.99
PGRP06401 Y_RNA.440-201ENST00000384120 114 ntBASIC2.62□□□□□ -1.99
PGRP06401 MIR518A2-201ENST00000384966 87 ntBASIC2.62□□□□□ -1.99
PGRP06401 RNA5SP465-201ENST00000391195 109 ntBASIC2.62□□□□□ -1.99
PGRP06401 HMGN2P39-201ENST00000398005 273 ntBASIC2.62□□□□□ -1.99
PGRP06401 RN7SKP200-201ENST00000410564 320 ntBASIC2.62□□□□□ -1.99
PGRP06401 AC087499.4-201ENST00000448505 178 ntBASIC2.62□□□□□ -1.99
PGRP06401 RNU6-240P-201ENST00000516098 97 ntBASIC2.62□□□□□ -1.99
PGRP06401 AP003484.1-201ENST00000530974 250 ntBASIC2.62□□□□□ -1.99
PGRP06401 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
PGRP06401 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PGRP06401 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PGRP06401 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
PGRP06401 SNORA3A-201ENST00000364113 130 ntBASIC2.61□□□□□ -1.99
PGRP06401 SNORD38C-201ENST00000384381 69 ntBASIC2.61□□□□□ -1.99
PGRP06401 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.61□□□□□ -1.99
PGRP06401 RNVU1-2-201ENST00000516326 135 ntBASIC2.61□□□□□ -1.99
PGRP06401 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
PGRP06401 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PGRP06401 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PGRP06401 RNU6-950P-201ENST00000384651 107 ntBASIC2.6□□□□□ -1.99
PGRP06401 AL034345.1-201ENST00000407768 123 ntBASIC2.6□□□□□ -1.99
PGRP06401 COX6CP6-201ENST00000490840 228 ntBASIC2.6□□□□□ -1.99
PGRP06401 RNA5SP356-201ENST00000515972 94 ntBASIC2.6□□□□□ -1.99
PGRP06401 MIR4435-1-201ENST00000582552 80 ntBASIC2.6□□□□□ -1.99
PGRP06401 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
PGRP06401 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.6□□□□□ -1.99
PGRP06401 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
PGRP06401 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.59□□□□□ -1.99
PGRP06401 RNU6-349P-201ENST00000362402 107 ntBASIC2.59□□□□□ -1.99
PGRP06401 SNORA4.2-201ENST00000365313 147 ntBASIC2.59□□□□□ -1.99
PGRP06401 RNU6-147P-201ENST00000383983 107 ntBASIC2.59□□□□□ -1.99
PGRP06401 SNORA48.1-201ENST00000390879 135 ntBASIC2.59□□□□□ -1.99
PGRP06401 U8.16-201ENST00000391279 133 ntBASIC2.59□□□□□ -1.99
PGRP06401 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.59□□□□□ -1.99
PGRP06401 SNORA18.7-201ENST00000516910 131 ntBASIC2.59□□□□□ -1.99
PGRP06401 RNU7-70P-201ENST00000516941 66 ntBASIC2.59□□□□□ -1.99
PGRP06401 AC007336.1-201ENST00000576365 3828 ntBASIC2.59□□□□□ -1.99
PGRP06401 MIR3613-201ENST00000579844 87 ntBASIC2.59□□□□□ -1.99
PGRP06401 ELOCP29-201ENST00000588193 334 ntBASIC2.59□□□□□ -1.99
PGRP06401 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
PGRP06401 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PGRP06401 AL442644.1-201ENST00000454390 3105 ntBASIC2.59□□□□□ -2
PGRP06401 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.59□□□□□ -2
PGRP06401 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.59□□□□□ -2
PGRP06401 RNU6-690P-201ENST00000365242 106 ntBASIC2.58□□□□□ -2
PGRP06401 RNU6-424P-201ENST00000384367 105 ntBASIC2.58□□□□□ -2
PGRP06401 MIR570-201ENST00000384917 97 ntBASIC2.58□□□□□ -2
PGRP06401 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
PGRP06401 SNORA31.25-201ENST00000517242 134 ntBASIC2.58□□□□□ -2
PGRP06401 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
PGRP06401 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
PGRP06401 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
PGRP06401 AC002984.1-201ENST00000591692 448 ntBASIC2.58□□□□□ -2
PGRP06401 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
PGRP06401 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.58□□□□□ -2
PGRP06401 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.57□□□□□ -2
PGRP06401 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PGRP06401 RNU1-133P-201ENST00000364867 167 ntBASIC2.57□□□□□ -2
PGRP06401 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
PGRP06401 RNY1P6-201ENST00000384193 109 ntBASIC2.57□□□□□ -2
PGRP06401 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
PGRP06401 SNORD23.1-201ENST00000408212 104 ntBASIC2.57□□□□□ -2
PGRP06401 RNU6-830P-201ENST00000516353 107 ntBASIC2.57□□□□□ -2
PGRP06401 RNA5SP168-201ENST00000516642 112 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms