Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
CHGBP05060 RNU6-23P-201ENST00000363283 107 ntBASIC2.47□□□□□ -2.01
CHGBP05060 SNORD61-201ENST00000384252 73 ntBASIC2.47□□□□□ -2.01
CHGBP05060 RNU11-5P-201ENST00000391216 129 ntBASIC2.47□□□□□ -2.01
CHGBP05060 RNA5SP338-201ENST00000410495 85 ntBASIC2.47□□□□□ -2.01
CHGBP05060 AL158823.1-201ENST00000418441 478 ntBASIC2.47□□□□□ -2.01
CHGBP05060 RNU6-504P-201ENST00000516568 104 ntBASIC2.47□□□□□ -2.01
CHGBP05060 RNU2-60P-201ENST00000517290 128 ntBASIC2.47□□□□□ -2.01
CHGBP05060 CYCSP26-201ENST00000534107 320 ntBASIC2.47□□□□□ -2.01
CHGBP05060 AC097639.2-201ENST00000603159 172 ntBASIC2.47□□□□□ -2.01
CHGBP05060 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.47□□□□□ -2.01
CHGBP05060 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHGBP05060 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
CHGBP05060 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHGBP05060 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
CHGBP05060 Y_RNA.52-201ENST00000362760 96 ntBASIC2.46□□□□□ -2.02
CHGBP05060 SNORA63.4-201ENST00000362763 126 ntBASIC2.46□□□□□ -2.02
CHGBP05060 Y_RNA.66-201ENST00000362862 102 ntBASIC2.46□□□□□ -2.02
CHGBP05060 RNU6-1064P-201ENST00000410626 104 ntBASIC2.46□□□□□ -2.02
CHGBP05060 RNA5SP127-201ENST00000411051 133 ntBASIC2.46□□□□□ -2.02
CHGBP05060 AL158147.1-201ENST00000443970 75 ntBASIC2.46□□□□□ -2.02
CHGBP05060 UBL5P3-201ENST00000475112 231 ntBASIC2.46□□□□□ -2.02
CHGBP05060 RNU6-693P-201ENST00000516134 107 ntBASIC2.46□□□□□ -2.02
CHGBP05060 RNU7-193P-201ENST00000516723 65 ntBASIC2.46□□□□□ -2.02
CHGBP05060 NDUFA5P6-201ENST00000542110 379 ntBASIC2.46□□□□□ -2.02
CHGBP05060 MTND5P32-201ENST00000560711 1802 ntBASIC2.46□□□□□ -2.02
CHGBP05060 AC131280.1-202ENST00000624067 4211 ntBASIC2.46□□□□□ -2.02
CHGBP05060 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHGBP05060 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.45□□□□□ -2.02
CHGBP05060 RNU6-429P-201ENST00000384582 108 ntBASIC2.45□□□□□ -2.02
CHGBP05060 SNORA40.5-201ENST00000391061 128 ntBASIC2.45□□□□□ -2.02
CHGBP05060 RN7SKP192-201ENST00000411291 327 ntBASIC2.45□□□□□ -2.02
CHGBP05060 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.45□□□□□ -2.02
CHGBP05060 AC008507.4-201ENST00000585464 127 ntBASIC2.45□□□□□ -2.02
CHGBP05060 AC108081.1-201ENST00000604358 221 ntBASIC2.45□□□□□ -2.02
CHGBP05060 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.45□□□□□ -2.02
CHGBP05060 MIR219B-201ENST00000637023 88 ntBASIC2.45□□□□□ -2.02
CHGBP05060 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.44□□□□□ -2.02
CHGBP05060 RNU6-476P-201ENST00000384726 107 ntBASIC2.44□□□□□ -2.02
CHGBP05060 SNORA48.3-201ENST00000391081 134 ntBASIC2.44□□□□□ -2.02
CHGBP05060 Y_RNA.630-201ENST00000411370 108 ntBASIC2.44□□□□□ -2.02
CHGBP05060 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.44□□□□□ -2.02
CHGBP05060 AC003989.2-201ENST00000440224 169 ntBASIC2.44□□□□□ -2.02
CHGBP05060 RNU1-131P-201ENST00000458943 161 ntBASIC2.44□□□□□ -2.02
CHGBP05060 RNU6-126P-201ENST00000516685 103 ntBASIC2.44□□□□□ -2.02
CHGBP05060 AP002004.2-201ENST00000531656 154 ntBASIC2.44□□□□□ -2.02
CHGBP05060 MIR3121-201ENST00000579680 77 ntBASIC2.44□□□□□ -2.02
CHGBP05060 AL022345.2-201ENST00000606307 135 ntBASIC2.44□□□□□ -2.02
CHGBP05060 AL353149.1-201ENST00000610667 244 ntBASIC2.44□□□□□ -2.02
CHGBP05060 MIR6132-201ENST00000622083 109 ntBASIC2.44□□□□□ -2.02
CHGBP05060 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.44□□□□□ -2.02
CHGBP05060 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CHGBP05060 AP006437.1-201ENST00000641440 3685 ntBASIC2.44□□□□□ -2.02
CHGBP05060 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.43□□□□□ -2.02
CHGBP05060 RNU6-1084P-201ENST00000362498 107 ntBASIC2.43□□□□□ -2.02
CHGBP05060 SNORD114-1-201ENST00000362705 72 ntBASIC2.43□□□□□ -2.02
CHGBP05060 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
CHGBP05060 CST2P1-201ENST00000425770 87 ntBASIC2.43□□□□□ -2.02
CHGBP05060 AC099677.2-201ENST00000436385 175 ntBASIC2.43□□□□□ -2.02
CHGBP05060 AL021397.1-201ENST00000451806 248 ntBASIC2.43□□□□□ -2.02
CHGBP05060 snoU13.15-201ENST00000459407 104 ntBASIC2.43□□□□□ -2.02
CHGBP05060 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.43□□□□□ -2.02
CHGBP05060 Y_RNA.714-201ENST00000517065 90 ntBASIC2.43□□□□□ -2.02
CHGBP05060 IGLV3-17-201ENST00000519099 244 ntBASIC2.43□□□□□ -2.02
CHGBP05060 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.43□□□□□ -2.02
CHGBP05060 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.43□□□□□ -2.02
CHGBP05060 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CHGBP05060 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHGBP05060 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHGBP05060 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.42□□□□□ -2.02
CHGBP05060 RNU6-1164P-201ENST00000364428 107 ntBASIC2.42□□□□□ -2.02
CHGBP05060 MIR522-201ENST00000385071 87 ntBASIC2.42□□□□□ -2.02
CHGBP05060 MIR624-201ENST00000385217 97 ntBASIC2.42□□□□□ -2.02
CHGBP05060 RNA5SP109-201ENST00000391010 116 ntBASIC2.42□□□□□ -2.02
CHGBP05060 AL603914.1-201ENST00000401964 204 ntBASIC2.42□□□□□ -2.02
CHGBP05060 SNORD23.1-201ENST00000408212 104 ntBASIC2.42□□□□□ -2.02
CHGBP05060 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHGBP05060 AL606517.2-201ENST00000442855 241 ntBASIC2.42□□□□□ -2.02
CHGBP05060 SNORD33.1-201ENST00000516213 88 ntBASIC2.42□□□□□ -2.02
CHGBP05060 Y_RNA.712-201ENST00000517011 92 ntBASIC2.42□□□□□ -2.02
CHGBP05060 MIR3126-201ENST00000577443 74 ntBASIC2.42□□□□□ -2.02
CHGBP05060 AC026271.5-201ENST00000577873 130 ntBASIC2.42□□□□□ -2.02
CHGBP05060 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
CHGBP05060 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHGBP05060 MIRLET7G-201ENST00000362280 84 ntBASIC2.41□□□□□ -2.02
CHGBP05060 SNORA16B-201ENST00000364674 135 ntBASIC2.41□□□□□ -2.02
CHGBP05060 Y_RNA.265-201ENST00000364677 108 ntBASIC2.41□□□□□ -2.02
CHGBP05060 RNU6-1144P-201ENST00000384247 104 ntBASIC2.41□□□□□ -2.02
CHGBP05060 AC245047.3-201ENST00000429428 127 ntBASIC2.41□□□□□ -2.02
CHGBP05060 HMGN2P3-201ENST00000433603 273 ntBASIC2.41□□□□□ -2.02
CHGBP05060 HMGN2P5-201ENST00000436882 273 ntBASIC2.41□□□□□ -2.02
CHGBP05060 SNRPGP13-201ENST00000442212 177 ntBASIC2.41□□□□□ -2.02
CHGBP05060 RNU7-94P-201ENST00000459576 63 ntBASIC2.41□□□□□ -2.02
CHGBP05060 RNU6-781P-201ENST00000516377 101 ntBASIC2.41□□□□□ -2.02
CHGBP05060 MIR3169-201ENST00000578032 83 ntBASIC2.41□□□□□ -2.02
CHGBP05060 AL365205.2-201ENST00000594586 68 ntBASIC2.41□□□□□ -2.02
CHGBP05060 MIR3914-2-201ENST00000637339 95 ntBASIC2.41□□□□□ -2.02
CHGBP05060 AP000553.5-201ENST00000641933 54 ntBASIC2.41□□□□□ -2.02
CHGBP05060 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.41□□□□□ -2.02
CHGBP05060 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms