Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 AC022254.1-201ENST00000567857 235 ntBASIC2.74□□□□□ -1.97
KRT1P04264 MIR4778-201ENST00000577635 80 ntBASIC2.74□□□□□ -1.97
KRT1P04264 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
KRT1P04264 AC242852.1-201ENST00000612151 96 ntBASIC2.74□□□□□ -1.97
KRT1P04264 AC244015.1-201ENST00000622301 99 ntBASIC2.74□□□□□ -1.97
KRT1P04264 AL137790.1-201ENST00000634283 177 ntBASIC2.74□□□□□ -1.97
KRT1P04264 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT1P04264 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
KRT1P04264 AC018630.2-201ENST00000534866 2403 ntBASIC2.73□□□□□ -1.97
KRT1P04264 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.73□□□□□ -1.97
KRT1P04264 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
KRT1P04264 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
KRT1P04264 Y_RNA.507-201ENST00000384500 99 ntBASIC2.73□□□□□ -1.97
KRT1P04264 Y_RNA.510-201ENST00000384511 114 ntBASIC2.73□□□□□ -1.97
KRT1P04264 RNU6-1274P-201ENST00000384557 107 ntBASIC2.73□□□□□ -1.97
KRT1P04264 RNU6-1104P-201ENST00000384723 104 ntBASIC2.73□□□□□ -1.97
KRT1P04264 MIR524-201ENST00000385242 87 ntBASIC2.73□□□□□ -1.97
KRT1P04264 MIR802-201ENST00000390235 94 ntBASIC2.73□□□□□ -1.97
KRT1P04264 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
KRT1P04264 RN7SL429P-201ENST00000479090 223 ntBASIC2.73□□□□□ -1.97
KRT1P04264 RN7SL489P-201ENST00000486185 223 ntBASIC2.73□□□□□ -1.97
KRT1P04264 RN7SL327P-201ENST00000488659 223 ntBASIC2.73□□□□□ -1.97
KRT1P04264 RNU7-61P-201ENST00000515897 61 ntBASIC2.73□□□□□ -1.97
KRT1P04264 MIR3683-201ENST00000580847 82 ntBASIC2.73□□□□□ -1.97
KRT1P04264 MIR4305-201ENST00000583252 102 ntBASIC2.73□□□□□ -1.97
KRT1P04264 AC073413.2-201ENST00000604332 360 ntBASIC2.73□□□□□ -1.97
KRT1P04264 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.73□□□□□ -1.97
KRT1P04264 RN7SL853P-201ENST00000617250 223 ntBASIC2.73□□□□□ -1.97
KRT1P04264 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
KRT1P04264 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRT1P04264 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
KRT1P04264 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.73□□□□□ -1.97
KRT1P04264 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
KRT1P04264 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
KRT1P04264 Y_RNA.96-201ENST00000363092 109 ntBASIC2.72□□□□□ -1.97
KRT1P04264 RNU1-96P-201ENST00000364163 162 ntBASIC2.72□□□□□ -1.97
KRT1P04264 SNORA67.1-201ENST00000364749 141 ntBASIC2.72□□□□□ -1.97
KRT1P04264 AL451046.2-201ENST00000403074 277 ntBASIC2.72□□□□□ -1.97
KRT1P04264 SNORA4.4-201ENST00000515921 135 ntBASIC2.72□□□□□ -1.97
KRT1P04264 RNU7-6P-201ENST00000516845 62 ntBASIC2.72□□□□□ -1.97
KRT1P04264 AL358944.1-201ENST00000528537 144 ntBASIC2.72□□□□□ -1.97
KRT1P04264 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRT1P04264 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRT1P04264 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.97
KRT1P04264 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
KRT1P04264 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
KRT1P04264 MIR126-201ENST00000362291 85 ntBASIC2.71□□□□□ -1.98
KRT1P04264 SNORA33-201ENST00000363664 130 ntBASIC2.71□□□□□ -1.98
KRT1P04264 MIR548O-201ENST00000408583 114 ntBASIC2.71□□□□□ -1.98
KRT1P04264 RNU6-938P-201ENST00000411285 103 ntBASIC2.71□□□□□ -1.98
KRT1P04264 AC073261.1-201ENST00000429409 121 ntBASIC2.71□□□□□ -1.98
KRT1P04264 AC105272.1-201ENST00000438604 198 ntBASIC2.71□□□□□ -1.98
KRT1P04264 AC009238.1-201ENST00000442165 424 ntBASIC2.71□□□□□ -1.98
KRT1P04264 AC025750.2-201ENST00000442609 450 ntBASIC2.71□□□□□ -1.98
KRT1P04264 AC009237.6-201ENST00000446969 424 ntBASIC2.71□□□□□ -1.98
KRT1P04264 HMGN2P18-201ENST00000450680 270 ntBASIC2.71□□□□□ -1.98
KRT1P04264 RNA5SP57-201ENST00000459463 123 ntBASIC2.71□□□□□ -1.98
KRT1P04264 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.71□□□□□ -1.98
KRT1P04264 AC022523.2-201ENST00000561045 150 ntBASIC2.71□□□□□ -1.98
KRT1P04264 U2.20-201ENST00000613956 192 ntBASIC2.71□□□□□ -1.98
KRT1P04264 U7.3-201ENST00000616123 62 ntBASIC2.71□□□□□ -1.98
KRT1P04264 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
KRT1P04264 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
KRT1P04264 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
KRT1P04264 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
KRT1P04264 Y_RNA.73-201ENST00000362910 113 ntBASIC2.7□□□□□ -1.98
KRT1P04264 SNORD115-28-201ENST00000363931 81 ntBASIC2.7□□□□□ -1.98
KRT1P04264 RNU6-675P-201ENST00000384236 104 ntBASIC2.7□□□□□ -1.98
KRT1P04264 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
KRT1P04264 RNU6-644P-201ENST00000391155 98 ntBASIC2.7□□□□□ -1.98
KRT1P04264 RNU6-1186P-201ENST00000410429 97 ntBASIC2.7□□□□□ -1.98
KRT1P04264 AC004941.2-201ENST00000427009 228 ntBASIC2.7□□□□□ -1.98
KRT1P04264 FTH1P12-201ENST00000432137 551 ntBASIC2.7□□□□□ -1.98
KRT1P04264 RNU7-80P-201ENST00000459562 61 ntBASIC2.7□□□□□ -1.98
KRT1P04264 RNU7-99P-201ENST00000516271 62 ntBASIC2.7□□□□□ -1.98
KRT1P04264 RNU6-586P-201ENST00000517265 104 ntBASIC2.7□□□□□ -1.98
KRT1P04264 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.7□□□□□ -1.98
KRT1P04264 AC019288.1-201ENST00000557918 224 ntBASIC2.7□□□□□ -1.98
KRT1P04264 MIR4694-201ENST00000578534 80 ntBASIC2.7□□□□□ -1.98
KRT1P04264 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.7□□□□□ -1.98
KRT1P04264 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.7□□□□□ -1.98
KRT1P04264 RNU6-787P-201ENST00000384032 107 ntBASIC2.69□□□□□ -1.98
KRT1P04264 Y_RNA.454-201ENST00000384224 113 ntBASIC2.69□□□□□ -1.98
KRT1P04264 SNORD116-22-201ENST00000384430 92 ntBASIC2.69□□□□□ -1.98
KRT1P04264 RNU6-24P-201ENST00000384440 107 ntBASIC2.69□□□□□ -1.98
KRT1P04264 Y_RNA.531-201ENST00000384589 121 ntBASIC2.69□□□□□ -1.98
KRT1P04264 MIR9-1-201ENST00000385198 89 ntBASIC2.69□□□□□ -1.98
KRT1P04264 RNU6-1291P-201ENST00000516591 104 ntBASIC2.69□□□□□ -1.98
KRT1P04264 MIR4666B-201ENST00000578142 81 ntBASIC2.69□□□□□ -1.98
KRT1P04264 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.69□□□□□ -1.98
KRT1P04264 AC006441.5-201ENST00000612680 209 ntBASIC2.69□□□□□ -1.98
KRT1P04264 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRT1P04264 RNA5SP432-201ENST00000362480 116 ntBASIC2.68□□□□□ -1.98
KRT1P04264 Y_RNA.37-201ENST00000362606 108 ntBASIC2.68□□□□□ -1.98
KRT1P04264 RNU6-170P-201ENST00000362832 104 ntBASIC2.68□□□□□ -1.98
KRT1P04264 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
KRT1P04264 RNU6-979P-201ENST00000383896 107 ntBASIC2.68□□□□□ -1.98
KRT1P04264 RNU6-442P-201ENST00000383968 104 ntBASIC2.68□□□□□ -1.98
KRT1P04264 RNU1-138P-201ENST00000384093 164 ntBASIC2.68□□□□□ -1.98
KRT1P04264 RNU1-52P-201ENST00000384190 164 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms