Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFAP04085 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFAP04085 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFAP04085 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
PDGFAP04085 MIR22-201ENST00000362190 85 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 SNORA4.2-201ENST00000365313 147 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 SNORA27-201ENST00000384323 126 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 SNORD12C-201ENST00000386307 89 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 RNA5SP270-201ENST00000411361 118 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 AC022018.1-201ENST00000430685 241 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 MIR4319-201ENST00000577285 85 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDGFAP04085 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDGFAP04085 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.82□□□□□ -1.96
PDGFAP04085 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PDGFAP04085 Y_RNA.309-201ENST00000365046 111 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 CST9LP2-201ENST00000437612 320 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 RNU7-164P-201ENST00000459221 62 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 RNU7-34P-201ENST00000459394 64 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 RNA5SP367-201ENST00000516557 118 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 SUB1P4-201ENST00000566062 339 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 MIR3945-201ENST00000581853 98 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 AC104984.5-201ENST00000586878 94 ntBASIC2.81□□□□□ -1.96
PDGFAP04085 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.8□□□□□ -1.96
PDGFAP04085 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFAP04085 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-34-201ENST00000362441 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-12-201ENST00000362583 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-29-201ENST00000362834 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-9-201ENST00000362912 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-21-201ENST00000362963 81 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 Y_RNA.85-201ENST00000363014 111 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-14-201ENST00000363090 81 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-13-201ENST00000363358 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-41-201ENST00000363608 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-11-201ENST00000363616 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-5-201ENST00000363633 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 RNY4P6-201ENST00000363667 96 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-39-201ENST00000363694 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-4-201ENST00000363810 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-16-201ENST00000363887 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-6-201ENST00000363942 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-42-201ENST00000364273 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-15-201ENST00000364809 81 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 RNU6-1107P-201ENST00000364817 104 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 Y_RNA.298-201ENST00000364960 107 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-1-201ENST00000364961 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-26-201ENST00000365067 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-10-201ENST00000365073 81 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-43-201ENST00000365503 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-36-201ENST00000365629 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 RNU1-109P-201ENST00000383960 147 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 MIR452-201ENST00000385020 85 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNX2P2-201ENST00000424553 323 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 AL035398.1-201ENST00000430869 322 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 RNU7-96P-201ENST00000459535 64 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 RPL23AP63-201ENST00000498752 471 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 RNA5SP481-201ENST00000516814 122 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 IGLV3-17-201ENST00000519099 244 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 AC002984.1-201ENST00000591692 448 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 AC078899.2-201ENST00000595282 212 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 SNORD115-40-201ENST00000606510 82 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 uc_338.28-201ENST00000612082 187 ntBASIC2.8□□□□□ -1.96
PDGFAP04085 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PDGFAP04085 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFAP04085 MIR342-201ENST00000362212 99 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 RNU1-51P-201ENST00000365345 176 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 RNU6-32P-201ENST00000383948 107 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 RNU6-13P-201ENST00000384248 107 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 RNU6-12P-201ENST00000384604 107 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 RNU6-41P-201ENST00000384741 107 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 RNA5SP501-201ENST00000410990 112 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 AC105272.1-201ENST00000438604 198 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFAP04085 RNU6-168P-201ENST00000516189 101 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 SUMO2P16-201ENST00000519475 264 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 AC090821.2-201ENST00000523552 176 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PDGFAP04085 MIR4709-201ENST00000577272 72 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 MIR3683-201ENST00000580847 82 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 ELOCP29-201ENST00000588193 334 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 U1.36-201ENST00000620684 176 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 AL589743.1-201ENST00000551932 2712 ntBASIC2.79□□□□□ -1.96
PDGFAP04085 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFAP04085 Y_RNA.49-201ENST00000362714 112 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 SNORA1.2-201ENST00000365189 134 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 MIR1267-201ENST00000408723 78 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 AC107297.1-201ENST00000459991 176 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 RPS29P24-201ENST00000486345 171 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 RNU6-998P-201ENST00000515894 101 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 RNA5SP170-201ENST00000517150 101 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 RNA5SP437-201ENST00000517249 129 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 MIR4305-201ENST00000583252 102 ntBASIC2.78□□□□□ -1.96
PDGFAP04085 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFAP04085 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFAP04085 AC007336.1-201ENST00000576365 3828 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 AL442644.1-201ENST00000454390 3105 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms