Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC006600.1-201ENST00000572529 153 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 AL355375.2-201ENST00000574825 175 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 MIR5188-201ENST00000583467 113 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 AC084781.2-201ENST00000615568 161 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.3□□□□□ -2.36
COL4A1P02462 RNY3P11-201ENST00000364153 102 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 Y_RNA.279-201ENST00000364763 95 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU6-1175P-201ENST00000365200 107 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU6-442P-201ENST00000383968 104 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU6-1323P-201ENST00000384025 107 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU6-708P-201ENST00000384217 107 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 SNORA72-201ENST00000384339 132 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 SNORA2B-201ENST00000384583 137 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 Y_RNA.537-201ENST00000384626 109 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNA5SP266-201ENST00000410273 108 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 Y_RNA.619-201ENST00000410951 90 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.29□□□□□ -2.36
COL4A1P02462 AC244098.3-201ENST00000424803 96 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 COX6CP6-201ENST00000490840 228 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 AC091951.2-201ENST00000500762 203 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 CYCTP-201ENST00000504253 315 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU7-115P-201ENST00000516433 55 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 RNU7-116P-201ENST00000516940 62 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 IGLVI-20-201ENST00000519296 130 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 AC018659.1-201ENST00000551083 169 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 AC023827.1-201ENST00000569247 97 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 AP003357.1-201ENST00000604497 148 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 AC011476.5-201ENST00000615594 130 ntBASIC0.29□□□□□ -2.36
COL4A1P02462 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
COL4A1P02462 Y_RNA.230-201ENST00000364348 109 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 Y_RNA.253-201ENST00000364562 112 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RNU6-1335P-201ENST00000365426 107 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 Y_RNA.462-201ENST00000384268 102 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 Y_RNA.488-201ENST00000384403 102 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RNU6-1297P-201ENST00000384415 104 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RNU6-125P-201ENST00000384505 107 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 MIR570-201ENST00000384917 97 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 MIR452-201ENST00000385020 85 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 Y_RNA.592-201ENST00000410274 109 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RPS26P5-201ENST00000418544 335 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 AF228730.4-201ENST00000421457 183 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.28□□□□□ -2.36
COL4A1P02462 AC005042.3-201ENST00000453230 174 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RNU6-155P-201ENST00000516347 100 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RNU6-1110P-201ENST00000516462 101 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RNU6-966P-201ENST00000516479 104 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 RNU6-1007P-201ENST00000516586 107 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 AC131055.1-201ENST00000584626 316 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 AC012433.1-201ENST00000588916 398 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 VN1R91P-201ENST00000594377 169 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 AL353765.1-201ENST00000605514 183 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 U2.1-201ENST00000618978 145 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 AC098679.4-201ENST00000624241 654 ntBASIC0.28□□□□□ -2.36
COL4A1P02462 MIR1-1-201ENST00000362147 71 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 SNORD81.1-201ENST00000363064 77 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 Y_RNA.166-201ENST00000363730 102 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6-934P-201ENST00000365154 107 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 Y_RNA.428-201ENST00000384078 102 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 Y_RNA.474-201ENST00000384341 102 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 Y_RNA.476-201ENST00000384347 108 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 SNORD116-29-201ENST00000384516 83 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 snoU13.21-201ENST00000459368 105 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RPL23AP54-201ENST00000495129 419 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.27□□□□□ -2.37
COL4A1P02462 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6-1170P-201ENST00000515974 106 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6-559P-201ENST00000516151 98 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 MIR4305-201ENST00000583252 102 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A1P02462 AC108676.2-201ENST00000605225 163 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 LARP7P1-201ENST00000605576 316 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 AL355073.2-201ENST00000612106 557 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 JPX_2.1-201ENST00000614161 69 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 AC138305.3-201ENST00000624988 240 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 SNORD95.1-201ENST00000364099 68 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6-268P-201ENST00000364174 107 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6-580P-201ENST00000365159 107 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 SNORD78.2-201ENST00000391076 69 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6-855P-201ENST00000410395 104 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU6-370P-201ENST00000411008 104 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 MCFD2P1-201ENST00000417812 300 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 AL035398.1-201ENST00000430869 322 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 U8.20-201ENST00000459445 131 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 SNORD123-201ENST00000459473 70 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 AC098869.1-201ENST00000481627 292 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A1P02462 RN7SKP164-201ENST00000516138 266 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 SNORD111.1-201ENST00000516421 86 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 RNU4-54P-201ENST00000516428 129 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 Y_RNA.691-201ENST00000516611 103 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A1P02462 MIR2681-201ENST00000581814 105 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms