Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-322P-201ENST00000516010 103 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 SNORD45.4-201ENST00000516629 73 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 AC090821.2-201ENST00000523552 176 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 MIR1273G-201ENST00000577677 100 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 AC022140.2-201ENST00000623500 188 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
PDGFBP01127 Y_RNA.16-201ENST00000362421 102 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 Y_RNA.68-201ENST00000362881 102 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 Y_RNA.115-201ENST00000363272 98 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RNU6-238P-201ENST00000363313 106 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 Y_RNA.222-201ENST00000364264 102 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 Y_RNA.251-201ENST00000364551 99 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 Y_RNA.368-201ENST00000365547 113 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 Y_RNA.456-201ENST00000384232 111 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 Y_RNA.512-201ENST00000384518 102 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 SNORA26.5-201ENST00000391215 123 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RNU7-141P-201ENST00000459304 62 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RNU6-496P-201ENST00000516145 99 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RNU6-191P-201ENST00000516295 94 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RNU6-764P-201ENST00000516396 105 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RNU6-570P-201ENST00000517051 105 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 AL358944.1-201ENST00000528537 144 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 AL512605.2-201ENST00000592972 256 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
PDGFBP01127 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.09□□□□□ -2.23
PDGFBP01127 RNU4-90P-201ENST00000362773 141 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 RNU6-801P-201ENST00000364087 105 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 Y_RNA.203-201ENST00000364106 102 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 SNORD50B-201ENST00000364995 70 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 SNORA33.2-201ENST00000365413 134 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 RNU6-639P-201ENST00000384074 107 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 RNU6-662P-201ENST00000384253 104 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 MIR522-201ENST00000385071 87 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 MIR802-201ENST00000390235 94 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 MIR1298-201ENST00000408783 112 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 SNORA36B-201ENST00000410438 131 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 U8.19-201ENST00000459095 133 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 MTATP8P1-201ENST00000467115 207 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 CYCTP-201ENST00000504253 315 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 RNU7-115P-201ENST00000516433 55 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 JPX_2.1-201ENST00000614161 69 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 MIR548AY-201ENST00000617669 107 ntBASIC1.08□□□□□ -2.24
PDGFBP01127 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
PDGFBP01127 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 snoU2_19.2-201ENST00000363024 80 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 Y_RNA.153-201ENST00000363615 91 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 RNA5SP457-201ENST00000363657 124 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 Y_RNA.380-201ENST00000365663 111 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 RNU6-1323P-201ENST00000384025 107 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 Y_RNA.541-201ENST00000384640 113 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 SNORD41-201ENST00000386967 70 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 MTCO1P5-201ENST00000433573 344 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 AP003072.1-201ENST00000531740 145 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 AC090049.2-201ENST00000550377 109 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 RPL23AP91-201ENST00000569211 455 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
PDGFBP01127 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
PDGFBP01127 Y_RNA.11-201ENST00000362375 109 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 RNU6-1209P-201ENST00000363655 107 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 SNORA2.2-201ENST00000365473 135 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 RNU6-514P-201ENST00000384208 107 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 MIR653-201ENST00000385279 96 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 RNU6-763P-201ENST00000390865 106 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
PDGFBP01127 SNORA18.7-201ENST00000516910 131 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 RNU7-116P-201ENST00000516940 62 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 AC136628.3-201ENST00000521868 290 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 AP003733.2-201ENST00000529409 171 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 AL590095.2-201ENST00000604136 117 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 AP003357.1-201ENST00000604497 148 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 AC008133.2-201ENST00000624540 351 ntBASIC1.06□□□□□ -2.24
PDGFBP01127 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
PDGFBP01127 SNORA25.1-201ENST00000362326 128 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 RNU6-833P-201ENST00000363486 107 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 Y_RNA.152-201ENST00000363578 100 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 snoU2-30.1-201ENST00000365012 70 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 SNORA72.4-201ENST00000384174 132 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 RNU6-383P-201ENST00000410864 94 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 RNU6-1054P-201ENST00000411293 104 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 RPL39P39-201ENST00000455840 151 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 SNORA31.2-201ENST00000516019 134 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 Y_RNA.681-201ENST00000516445 113 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 AC127455.1-201ENST00000565496 145 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 MIR4714-201ENST00000580728 77 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 AL355297.3-201ENST00000604082 446 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 AC037487.3-201ENST00000606668 112 ntBASIC1.05□□□□□ -2.24
PDGFBP01127 SNORD14E-201ENST00000364009 85 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 Y_RNA.293-201ENST00000364908 93 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 RNU6-290P-201ENST00000365212 101 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 AC117470.1-201ENST00000381974 330 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 RNU6-1227P-201ENST00000383981 107 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 SNORA53-201ENST00000391141 249 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms