Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 Y_RNA.581-201ENST00000391017 97 ntBASIC0.94□□□□□ -2.26
PGK1P00558 MIR1298-201ENST00000408783 112 ntBASIC0.94□□□□□ -2.26
PGK1P00558 Y_RNA.602-201ENST00000410535 92 ntBASIC0.94□□□□□ -2.26
PGK1P00558 RNU6-1054P-201ENST00000411293 104 ntBASIC0.94□□□□□ -2.26
PGK1P00558 SNRPGP10-201ENST00000432323 225 ntBASIC0.94□□□□□ -2.26
PGK1P00558 AC245047.7-201ENST00000440265 293 ntBASIC0.94□□□□□ -2.26
PGK1P00558 RNU7-141P-201ENST00000459304 62 ntBASIC0.94□□□□□ -2.26
PGK1P00558 NDUFA4P2-201ENST00000489989 244 ntBASIC0.94□□□□□ -2.26
PGK1P00558 AC117454.1-201ENST00000491120 168 ntBASIC0.94□□□□□ -2.26
PGK1P00558 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
PGK1P00558 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.94□□□□□ -2.26
PGK1P00558 SEPT14P8-201ENST00000508026 178 ntBASIC0.94□□□□□ -2.26
PGK1P00558 RNU6-322P-201ENST00000516010 103 ntBASIC0.94□□□□□ -2.26
PGK1P00558 SNORA31.4-201ENST00000516049 129 ntBASIC0.94□□□□□ -2.26
PGK1P00558 RNU6-191P-201ENST00000516295 94 ntBASIC0.94□□□□□ -2.26
PGK1P00558 RNU7-116P-201ENST00000516940 62 ntBASIC0.94□□□□□ -2.26
PGK1P00558 AC090142.3-201ENST00000519012 385 ntBASIC0.94□□□□□ -2.26
PGK1P00558 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.94□□□□□ -2.26
PGK1P00558 AC113195.1-201ENST00000579952 141 ntBASIC0.94□□□□□ -2.26
PGK1P00558 AC005357.1-201ENST00000588399 301 ntBASIC0.94□□□□□ -2.26
PGK1P00558 POLR3GP1-201ENST00000594073 261 ntBASIC0.94□□□□□ -2.26
PGK1P00558 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
PGK1P00558 Y_RNA.158-201ENST00000363651 101 ntBASIC0.93□□□□□ -2.26
PGK1P00558 Y_RNA.203-201ENST00000364106 102 ntBASIC0.93□□□□□ -2.26
PGK1P00558 RNU6-806P-201ENST00000365147 105 ntBASIC0.93□□□□□ -2.26
PGK1P00558 AC117470.1-201ENST00000381974 330 ntBASIC0.93□□□□□ -2.26
PGK1P00558 Y_RNA.389-201ENST00000383924 113 ntBASIC0.93□□□□□ -2.26
PGK1P00558 Y_RNA.527-201ENST00000384573 102 ntBASIC0.93□□□□□ -2.26
PGK1P00558 MIR452-201ENST00000385020 85 ntBASIC0.93□□□□□ -2.26
PGK1P00558 MIR516B2-201ENST00000385190 85 ntBASIC0.93□□□□□ -2.26
PGK1P00558 RNU6-910P-201ENST00000390844 107 ntBASIC0.93□□□□□ -2.26
PGK1P00558 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.93□□□□□ -2.26
PGK1P00558 RPL21P38-201ENST00000418090 167 ntBASIC0.93□□□□□ -2.26
PGK1P00558 ELOCP20-201ENST00000422460 345 ntBASIC0.93□□□□□ -2.26
PGK1P00558 AC004941.2-201ENST00000427009 228 ntBASIC0.93□□□□□ -2.26
PGK1P00558 MTCO1P5-201ENST00000433573 344 ntBASIC0.93□□□□□ -2.26
PGK1P00558 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
PGK1P00558 SNORD45.4-201ENST00000516629 73 ntBASIC0.93□□□□□ -2.26
PGK1P00558 RNU6-1137P-201ENST00000517073 99 ntBASIC0.93□□□□□ -2.26
PGK1P00558 RNU6-988P-201ENST00000519081 107 ntBASIC0.93□□□□□ -2.26
PGK1P00558 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
PGK1P00558 MIR3192-201ENST00000584920 77 ntBASIC0.93□□□□□ -2.26
PGK1P00558 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.93□□□□□ -2.26
PGK1P00558 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
PGK1P00558 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
PGK1P00558 snoU2_19.2-201ENST00000363024 80 ntBASIC0.92□□□□□ -2.26
PGK1P00558 Y_RNA.153-201ENST00000363615 91 ntBASIC0.92□□□□□ -2.26
PGK1P00558 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
PGK1P00558 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.92□□□□□ -2.26
PGK1P00558 RNU6-101P-201ENST00000410323 104 ntBASIC0.92□□□□□ -2.26
PGK1P00558 MLLT10P1-201ENST00000418346 262 ntBASIC0.92□□□□□ -2.26
PGK1P00558 RPL23AP54-201ENST00000495129 419 ntBASIC0.92□□□□□ -2.26
PGK1P00558 AC136628.3-201ENST00000521868 290 ntBASIC0.92□□□□□ -2.26
PGK1P00558 AC131281.1-201ENST00000522984 164 ntBASIC0.92□□□□□ -2.26
PGK1P00558 AL357312.1-201ENST00000603879 298 ntBASIC0.92□□□□□ -2.26
PGK1P00558 RNU6-1209P-201ENST00000363655 107 ntBASIC0.91□□□□□ -2.26
PGK1P00558 Y_RNA.214-201ENST00000364201 112 ntBASIC0.91□□□□□ -2.26
PGK1P00558 Y_RNA.276-201ENST00000364732 109 ntBASIC0.91□□□□□ -2.26
PGK1P00558 Y_RNA.455-201ENST00000384230 98 ntBASIC0.91□□□□□ -2.26
PGK1P00558 Y_RNA.541-201ENST00000384640 113 ntBASIC0.91□□□□□ -2.26
PGK1P00558 MIR215-201ENST00000384858 110 ntBASIC0.91□□□□□ -2.26
PGK1P00558 RNU6-131P-201ENST00000391144 107 ntBASIC0.91□□□□□ -2.26
PGK1P00558 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
PGK1P00558 MIR1278-201ENST00000408753 81 ntBASIC0.91□□□□□ -2.26
PGK1P00558 POLR2J4-204ENST00000418424 324 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AC024067.1-201ENST00000426199 223 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AC005534.2-201ENST00000431047 433 ntBASIC0.91□□□□□ -2.26
PGK1P00558 SNRPGP14-201ENST00000435400 219 ntBASIC0.91□□□□□ -2.26
PGK1P00558 LINC01399-202ENST00000458450 244 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AC098869.1-201ENST00000481627 292 ntBASIC0.91□□□□□ -2.26
PGK1P00558 RPS26P48-201ENST00000491713 339 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.91□□□□□ -2.26
PGK1P00558 RNU6-947P-201ENST00000516264 106 ntBASIC0.91□□□□□ -2.26
PGK1P00558 RNU6-764P-201ENST00000516396 105 ntBASIC0.91□□□□□ -2.26
PGK1P00558 RNU6-1153P-201ENST00000516760 105 ntBASIC0.91□□□□□ -2.26
PGK1P00558 Y_RNA.721-201ENST00000517207 102 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AC133485.1-201ENST00000567176 124 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AC138907.6-201ENST00000568401 126 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AL391903.3-201ENST00000612158 163 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
PGK1P00558 AC134026.1-201ENST00000623249 2239 ntBASIC0.91□□□□□ -2.26
PGK1P00558 RNU4-90P-201ENST00000362773 141 ntBASIC0.9□□□□□ -2.27
PGK1P00558 Y_RNA.210-201ENST00000364161 110 ntBASIC0.9□□□□□ -2.27
PGK1P00558 snoU2-30.1-201ENST00000365012 70 ntBASIC0.9□□□□□ -2.27
PGK1P00558 RNU6-290P-201ENST00000365212 101 ntBASIC0.9□□□□□ -2.27
PGK1P00558 Y_RNA.374-201ENST00000365606 101 ntBASIC0.9□□□□□ -2.27
PGK1P00558 Y_RNA.380-201ENST00000365663 111 ntBASIC0.9□□□□□ -2.27
PGK1P00558 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.9□□□□□ -2.27
PGK1P00558 RNU6-437P-201ENST00000459408 95 ntBASIC0.9□□□□□ -2.27
PGK1P00558 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
PGK1P00558 MRPS35P2-201ENST00000508242 191 ntBASIC0.9□□□□□ -2.27
PGK1P00558 SNORD79.1-201ENST00000516069 84 ntBASIC0.9□□□□□ -2.27
PGK1P00558 Y_RNA.701-201ENST00000516812 110 ntBASIC0.9□□□□□ -2.27
PGK1P00558 AL355297.3-201ENST00000604082 446 ntBASIC0.9□□□□□ -2.27
PGK1P00558 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
PGK1P00558 MIR19B1-201ENST00000384829 87 ntBASIC0.89□□□□□ -2.27
PGK1P00558 RNU6-763P-201ENST00000390865 106 ntBASIC0.89□□□□□ -2.27
PGK1P00558 SNORA75.2-201ENST00000391138 150 ntBASIC0.89□□□□□ -2.27
PGK1P00558 SNORA75.3-201ENST00000391231 150 ntBASIC0.89□□□□□ -2.27
PGK1P00558 SNORA36B-201ENST00000410438 131 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms