Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 snoU13.21-201ENST00000459368 105 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 RNU6-911P-201ENST00000516523 104 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 MIR2115-201ENST00000516657 100 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 AC006600.1-201ENST00000572529 153 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 MIR4711-201ENST00000578274 70 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 MIR3145-201ENST00000580727 82 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 AC113139.1-201ENST00000605049 239 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 AC091925.1-201ENST00000623204 462 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
SEMA3DO95025 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
SEMA3DO95025 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.36□□□□□ -2.35
SEMA3DO95025 RNU6-369P-201ENST00000362515 102 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 RNU6-490P-201ENST00000362985 107 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 RNU6-396P-201ENST00000365369 105 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 AC099799.1-201ENST00000439809 192 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 RNU6-830P-201ENST00000516353 107 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 RNU7-115P-201ENST00000516433 55 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.36□□□□□ -2.35
SEMA3DO95025 AC127455.1-201ENST00000565496 145 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 MIR4423-201ENST00000580922 80 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 AC104695.3-201ENST00000604052 296 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 MIR6779-201ENST00000617283 64 ntBASIC0.36□□□□□ -2.35
SEMA3DO95025 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SEMA3DO95025 Y_RNA.168-201ENST00000363740 102 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 Y_RNA.248-201ENST00000364501 109 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 SNORA51.10-201ENST00000384418 136 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 SNORD72-201ENST00000390994 80 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 MTCO2P33-201ENST00000402100 465 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 AC015818.7-201ENST00000428754 109 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 AC087499.7-201ENST00000441958 109 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 VN1R91P-201ENST00000594377 169 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 AC092794.1-201ENST00000612734 582 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 MIR548AY-201ENST00000617669 107 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 MTND1P7-201ENST00000632801 297 ntBASIC0.35□□□□□ -2.35
SEMA3DO95025 SNORD45.3-201ENST00000363836 72 ntBASIC0.34□□□□□ -2.36
SEMA3DO95025 RNU6-1048P-201ENST00000364054 107 ntBASIC0.34□□□□□ -2.36
SEMA3DO95025 RNU6-205P-201ENST00000390858 107 ntBASIC0.34□□□□□ -2.36
SEMA3DO95025 AC008507.4-201ENST00000585464 127 ntBASIC0.34□□□□□ -2.36
SEMA3DO95025 AC087685.1-201ENST00000587507 141 ntBASIC0.34□□□□□ -2.36
SEMA3DO95025 MIR4791-201ENST00000607666 84 ntBASIC0.34□□□□□ -2.36
SEMA3DO95025 AC015726.2-201ENST00000620112 122 ntBASIC0.34□□□□□ -2.36
SEMA3DO95025 Y_RNA.259-201ENST00000364619 101 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 Y_RNA.370-201ENST00000365589 108 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 SNORD116-29-201ENST00000384516 83 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 MIR193B-201ENST00000384907 83 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 AL603910.2-201ENST00000407268 136 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 RNU4-30P-201ENST00000410245 143 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 SNORD83.1-201ENST00000411362 77 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 AC010655.3-201ENST00000478818 450 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 RN7SKP12-201ENST00000516275 143 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 RNU7-110P-201ENST00000516891 62 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 RPL23AP91-201ENST00000569211 455 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 MIR5188-201ENST00000583467 113 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 AC133104.2-201ENST00000615272 193 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.33□□□□□ -2.36
SEMA3DO95025 MIR4272-201ENST00000635924 64 ntBASIC0.33□□□□□ -2.36
SEMA3DO95025 Y_RNA.537-201ENST00000384626 109 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 MIR573-201ENST00000384964 99 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 MIR520H-201ENST00000385126 88 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 SNORA36B-201ENST00000410438 131 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 RNU2-14P-201ENST00000411053 191 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 RNU6-177P-201ENST00000411257 104 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 AC024067.1-201ENST00000426199 223 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 AC011373.1-201ENST00000607270 237 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 AC010205.1-201ENST00000616668 449 ntBASIC0.32□□□□□ -2.36
SEMA3DO95025 Y_RNA.205-201ENST00000364128 113 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU6-934P-201ENST00000365154 107 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU6-1040P-201ENST00000383974 107 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 Y_RNA.458-201ENST00000384240 102 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 Y_RNA.462-201ENST00000384268 102 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 Y_RNA.463-201ENST00000384271 102 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU6-125P-201ENST00000384505 107 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 MIR520F-201ENST00000384824 87 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNY4P36-201ENST00000391116 96 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 MTND1P14-201ENST00000427400 950 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.31□□□□□ -2.36
SEMA3DO95025 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU7-141P-201ENST00000459304 62 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU6-437P-201ENST00000459408 95 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU6-977P-201ENST00000516411 103 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.31□□□□□ -2.36
SEMA3DO95025 AL080274.1-201ENST00000605565 220 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 Y_RNA.772-201ENST00000606692 102 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 AC025253.1-201ENST00000613623 543 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 U6atac.1-201ENST00000616025 117 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 AC139792.2-201ENST00000624218 587 ntBASIC0.31□□□□□ -2.36
SEMA3DO95025 RNU6-580P-201ENST00000365159 107 ntBASIC0.3□□□□□ -2.36
SEMA3DO95025 Y_RNA.376-201ENST00000365638 108 ntBASIC0.3□□□□□ -2.36
SEMA3DO95025 Y_RNA.387-201ENST00000383918 102 ntBASIC0.3□□□□□ -2.36
SEMA3DO95025 Y_RNA.428-201ENST00000384078 102 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms