Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MTATP6P29-201ENST00000415057 132 ntBASIC2.62□□□□□ -1.99
VAMP4O75379 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.62□□□□□ -1.99
VAMP4O75379 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VAMP4O75379 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.62□□□□□ -1.99
VAMP4O75379 RNU7-28P-201ENST00000516759 62 ntBASIC2.62□□□□□ -1.99
VAMP4O75379 AC022217.4-201ENST00000604389 163 ntBASIC2.62□□□□□ -1.99
VAMP4O75379 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.62□□□□□ -1.99
VAMP4O75379 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.61□□□□□ -1.99
VAMP4O75379 SNORD24-201ENST00000383884 75 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 RNU6-735P-201ENST00000410612 107 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 RNU6-1333P-201ENST00000516162 93 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 SNORA31.11-201ENST00000516528 139 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 RNU6-1234P-201ENST00000516877 103 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 AC007751.1-201ENST00000529260 376 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 AC078899.2-201ENST00000595282 212 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 MIR6840-201ENST00000611937 71 ntBASIC2.61□□□□□ -1.99
VAMP4O75379 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VAMP4O75379 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VAMP4O75379 RNU6-888P-201ENST00000363010 101 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 RNU6-1019P-201ENST00000364424 107 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 U8.5-201ENST00000364528 136 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 Y_RNA.261-201ENST00000364631 102 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 RNU6-1292P-201ENST00000383856 107 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 SNORA80E-201ENST00000384744 137 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 SNORD72-201ENST00000390994 80 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 RNA5SP482-201ENST00000391269 118 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 RNA5SP127-201ENST00000411051 133 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 Y_RNA.692-201ENST00000516627 105 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 RNU7-193P-201ENST00000516723 65 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 Y_RNA.757-201ENST00000578934 114 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 SNRPGP19-201ENST00000603826 189 ntBASIC2.6□□□□□ -1.99
VAMP4O75379 SNORD115-3-201ENST00000363100 82 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 MLLT10P1-201ENST00000418346 262 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 BX510359.4-201ENST00000423750 193 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 AL021397.1-201ENST00000451806 248 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.59□□□□□ -1.99
VAMP4O75379 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.59□□□□□ -1.99
VAMP4O75379 SNORA18.4-201ENST00000516440 124 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 RNU6-659P-201ENST00000516454 104 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 AC084364.2-201ENST00000546924 395 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 MIR3121-201ENST00000579680 77 ntBASIC2.59□□□□□ -1.99
VAMP4O75379 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.59□□□□□ -1.99
VAMP4O75379 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VAMP4O75379 ZNF355P-201ENST00000427301 3216 ntBASIC2.59□□□□□ -2
VAMP4O75379 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VAMP4O75379 U8.1-201ENST00000362843 134 ntBASIC2.58□□□□□ -2
VAMP4O75379 SNORD61-201ENST00000384252 73 ntBASIC2.58□□□□□ -2
VAMP4O75379 Y_RNA.563-201ENST00000384707 108 ntBASIC2.58□□□□□ -2
VAMP4O75379 MIR891A-201ENST00000401237 79 ntBASIC2.58□□□□□ -2
VAMP4O75379 AL603914.1-201ENST00000401964 204 ntBASIC2.58□□□□□ -2
VAMP4O75379 AC245047.3-201ENST00000429428 127 ntBASIC2.58□□□□□ -2
VAMP4O75379 AL606517.2-201ENST00000442855 241 ntBASIC2.58□□□□□ -2
VAMP4O75379 RN7SKP179-201ENST00000516126 217 ntBASIC2.58□□□□□ -2
VAMP4O75379 AL359881.1-201ENST00000602916 267 ntBASIC2.58□□□□□ -2
VAMP4O75379 AC069114.2-201ENST00000604699 304 ntBASIC2.58□□□□□ -2
VAMP4O75379 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.58□□□□□ -2
VAMP4O75379 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.58□□□□□ -2
VAMP4O75379 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
VAMP4O75379 AC245060.5-201ENST00000610778 3293 ntBASIC2.58□□□□□ -2
VAMP4O75379 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.57□□□□□ -2
VAMP4O75379 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
VAMP4O75379 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VAMP4O75379 Y_RNA.273-201ENST00000364703 102 ntBASIC2.57□□□□□ -2
VAMP4O75379 SNORD18B-201ENST00000365659 72 ntBASIC2.57□□□□□ -2
VAMP4O75379 RNU11-3P-201ENST00000391111 133 ntBASIC2.57□□□□□ -2
VAMP4O75379 AC069257.2-201ENST00000441819 155 ntBASIC2.57□□□□□ -2
VAMP4O75379 UBL5P3-201ENST00000475112 231 ntBASIC2.57□□□□□ -2
VAMP4O75379 AC006441.5-201ENST00000612680 209 ntBASIC2.57□□□□□ -2
VAMP4O75379 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
VAMP4O75379 SNORD114-1-201ENST00000362705 72 ntBASIC2.56□□□□□ -2
VAMP4O75379 SNORD68-201ENST00000363214 84 ntBASIC2.56□□□□□ -2
VAMP4O75379 Y_RNA.280-201ENST00000364765 112 ntBASIC2.56□□□□□ -2
VAMP4O75379 SNORA1-201ENST00000384107 130 ntBASIC2.56□□□□□ -2
VAMP4O75379 RNA5SP465-201ENST00000391195 109 ntBASIC2.56□□□□□ -2
VAMP4O75379 MIR1283-2-201ENST00000408621 87 ntBASIC2.56□□□□□ -2
VAMP4O75379 SNRPGP13-201ENST00000442212 177 ntBASIC2.56□□□□□ -2
VAMP4O75379 AC025033.1-201ENST00000463883 194 ntBASIC2.56□□□□□ -2
VAMP4O75379 Y_RNA.666-201ENST00000516187 112 ntBASIC2.56□□□□□ -2
VAMP4O75379 AC090049.2-201ENST00000550377 109 ntBASIC2.56□□□□□ -2
VAMP4O75379 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
VAMP4O75379 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VAMP4O75379 AL596028.1-201ENST00000326971 197 ntBASIC2.55□□□□□ -2
VAMP4O75379 RNU6-834P-201ENST00000362367 110 ntBASIC2.55□□□□□ -2
VAMP4O75379 RNU6-442P-201ENST00000383968 104 ntBASIC2.55□□□□□ -2
VAMP4O75379 MIR548A2-201ENST00000384956 97 ntBASIC2.55□□□□□ -2
VAMP4O75379 RNU6-440P-201ENST00000390882 105 ntBASIC2.55□□□□□ -2
VAMP4O75379 RNA5SP109-201ENST00000391010 116 ntBASIC2.55□□□□□ -2
VAMP4O75379 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.55□□□□□ -2
VAMP4O75379 snoU13.15-201ENST00000459407 104 ntBASIC2.55□□□□□ -2
VAMP4O75379 RNU6-693P-201ENST00000516134 107 ntBASIC2.55□□□□□ -2
VAMP4O75379 Y_RNA.686-201ENST00000516548 134 ntBASIC2.55□□□□□ -2
VAMP4O75379 RNU2-60P-201ENST00000517290 128 ntBASIC2.55□□□□□ -2
VAMP4O75379 MIR8054-201ENST00000620877 86 ntBASIC2.55□□□□□ -2
VAMP4O75379 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
VAMP4O75379 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VAMP4O75379 RNU6-1084P-201ENST00000362498 107 ntBASIC2.54□□□□□ -2
VAMP4O75379 Y_RNA.52-201ENST00000362760 96 ntBASIC2.54□□□□□ -2
VAMP4O75379 Y_RNA.265-201ENST00000364677 108 ntBASIC2.54□□□□□ -2
VAMP4O75379 snoU2-30.1-201ENST00000365012 70 ntBASIC2.54□□□□□ -2
VAMP4O75379 Y_RNA.336-201ENST00000365307 109 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms