Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR561-201ENST00000385216 97 ntBASIC2.57□□□□□ -2
TRIM13O60858 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRIM13O60858 RNU11-5P-201ENST00000391216 129 ntBASIC2.57□□□□□ -2
TRIM13O60858 AC060773.1-201ENST00000421698 310 ntBASIC2.57□□□□□ -2
TRIM13O60858 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
TRIM13O60858 AC099677.2-201ENST00000436385 175 ntBASIC2.57□□□□□ -2
TRIM13O60858 HMGN2P34-201ENST00000437647 269 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU1-131P-201ENST00000458943 161 ntBASIC2.57□□□□□ -2
TRIM13O60858 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU2-35P-201ENST00000516446 142 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU7-25P-201ENST00000516544 62 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU7-70P-201ENST00000516941 66 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU6-341P-201ENST00000516973 96 ntBASIC2.57□□□□□ -2
TRIM13O60858 Y_RNA.714-201ENST00000517065 90 ntBASIC2.57□□□□□ -2
TRIM13O60858 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.57□□□□□ -2
TRIM13O60858 AC091544.4-201ENST00000555268 342 ntBASIC2.57□□□□□ -2
TRIM13O60858 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.57□□□□□ -2
TRIM13O60858 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.57□□□□□ -2
TRIM13O60858 AC080100.1-201ENST00000624239 5356 ntBASIC2.56□□□□□ -2
TRIM13O60858 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TRIM13O60858 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM13O60858 SNORD115-28-201ENST00000363931 81 ntBASIC2.56□□□□□ -2
TRIM13O60858 Y_RNA.440-201ENST00000384120 114 ntBASIC2.56□□□□□ -2
TRIM13O60858 RNU6-675P-201ENST00000384236 104 ntBASIC2.56□□□□□ -2
TRIM13O60858 RNA5SP171-201ENST00000391071 115 ntBASIC2.56□□□□□ -2
TRIM13O60858 RNU6-279P-201ENST00000391297 101 ntBASIC2.56□□□□□ -2
TRIM13O60858 AC004941.2-201ENST00000427009 228 ntBASIC2.56□□□□□ -2
TRIM13O60858 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
TRIM13O60858 snoU13.22-201ENST00000459428 104 ntBASIC2.56□□□□□ -2
TRIM13O60858 AC113410.1-201ENST00000505029 247 ntBASIC2.56□□□□□ -2
TRIM13O60858 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.56□□□□□ -2
TRIM13O60858 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
TRIM13O60858 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
TRIM13O60858 SNORD36C-201ENST00000516733 66 ntBASIC2.56□□□□□ -2
TRIM13O60858 RNU7-6P-201ENST00000516845 62 ntBASIC2.56□□□□□ -2
TRIM13O60858 U7.3-201ENST00000616123 62 ntBASIC2.56□□□□□ -2
TRIM13O60858 MIR8057-201ENST00000620957 69 ntBASIC2.56□□□□□ -2
TRIM13O60858 MIR6079-201ENST00000635807 62 ntBASIC2.56□□□□□ -2
TRIM13O60858 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
TRIM13O60858 MIR340-201ENST00000362125 95 ntBASIC2.55□□□□□ -2
TRIM13O60858 RNU6-1296P-201ENST00000383879 107 ntBASIC2.55□□□□□ -2
TRIM13O60858 RNU6-644P-201ENST00000391155 98 ntBASIC2.55□□□□□ -2
TRIM13O60858 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.55□□□□□ -2
TRIM13O60858 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
TRIM13O60858 RNU6-938P-201ENST00000411285 103 ntBASIC2.55□□□□□ -2
TRIM13O60858 AC123900.1-201ENST00000420390 96 ntBASIC2.55□□□□□ -2
TRIM13O60858 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
TRIM13O60858 AL353689.1-201ENST00000438895 199 ntBASIC2.55□□□□□ -2
TRIM13O60858 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.55□□□□□ -2
TRIM13O60858 AC093259.1-201ENST00000509755 300 ntBASIC2.55□□□□□ -2
TRIM13O60858 MIR4694-201ENST00000578534 80 ntBASIC2.55□□□□□ -2
TRIM13O60858 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
TRIM13O60858 AC012531.4-201ENST00000616509 177 ntBASIC2.55□□□□□ -2
TRIM13O60858 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.55□□□□□ -2
TRIM13O60858 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.55□□□□□ -2
TRIM13O60858 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
TRIM13O60858 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRIM13O60858 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM13O60858 snoU2-30.2-201ENST00000362805 70 ntBASIC2.54□□□□□ -2
TRIM13O60858 RNU6-170P-201ENST00000362832 104 ntBASIC2.54□□□□□ -2
TRIM13O60858 Y_RNA.267-201ENST00000364679 109 ntBASIC2.54□□□□□ -2
TRIM13O60858 Y_RNA.332-201ENST00000365271 113 ntBASIC2.54□□□□□ -2
TRIM13O60858 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM13O60858 Y_RNA.531-201ENST00000384589 121 ntBASIC2.54□□□□□ -2
TRIM13O60858 Y_RNA.547-201ENST00000384654 119 ntBASIC2.54□□□□□ -2
TRIM13O60858 MIR802-201ENST00000390235 94 ntBASIC2.54□□□□□ -2
TRIM13O60858 AL451046.2-201ENST00000403074 277 ntBASIC2.54□□□□□ -2
TRIM13O60858 SNRPGP14-201ENST00000435400 219 ntBASIC2.54□□□□□ -2
TRIM13O60858 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.54□□□□□ -2
TRIM13O60858 AL162274.2-201ENST00000614406 332 ntBASIC2.54□□□□□ -2
TRIM13O60858 AC087741.2-201ENST00000619415 172 ntBASIC2.54□□□□□ -2
TRIM13O60858 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM13O60858 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM13O60858 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TRIM13O60858 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TRIM13O60858 RNU6-832P-201ENST00000363319 107 ntBASIC2.53□□□□□ -2
TRIM13O60858 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
TRIM13O60858 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
TRIM13O60858 RNU6-442P-201ENST00000383968 104 ntBASIC2.53□□□□□ -2
TRIM13O60858 Y_RNA.507-201ENST00000384500 99 ntBASIC2.53□□□□□ -2
TRIM13O60858 MIR23B-201ENST00000384832 97 ntBASIC2.53□□□□□ -2
TRIM13O60858 MIR577-201ENST00000385196 96 ntBASIC2.53□□□□□ -2
TRIM13O60858 AL445646.1-201ENST00000431784 216 ntBASIC2.53□□□□□ -2
TRIM13O60858 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
TRIM13O60858 RNU6-162P-201ENST00000516228 103 ntBASIC2.53□□□□□ -2
TRIM13O60858 RNU6-795P-201ENST00000516323 103 ntBASIC2.53□□□□□ -2
TRIM13O60858 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRIM13O60858 MIR3618-201ENST00000580330 88 ntBASIC2.53□□□□□ -2
TRIM13O60858 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.53□□□□□ -2
TRIM13O60858 AC091932.4-201ENST00000623386 200 ntBASIC2.53□□□□□ -2
TRIM13O60858 U6.108-201ENST00000637764 58 ntBASIC2.53□□□□□ -2
TRIM13O60858 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM13O60858 RNU6-661P-201ENST00000362409 107 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 SNORD115-19-201ENST00000363098 82 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 SNORD115-18-201ENST00000363293 82 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 RNU6-1125P-201ENST00000363601 107 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 RNU6-268P-201ENST00000364174 107 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 SNORD115-17-201ENST00000364612 82 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 RNU6-979P-201ENST00000383896 107 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 MIR9-1-201ENST00000385198 89 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms