Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SNORA25.16-201ENST00000516741 121 ntBASIC-1.32□□□□□ -2.62
SSSCA1O60232 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.32□□□□□ -2.62
SSSCA1O60232 MIR4423-201ENST00000580922 80 ntBASIC-1.32□□□□□ -2.62
SSSCA1O60232 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 RNU6-268P-201ENST00000364174 107 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 MIR539-201ENST00000365690 78 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 SNORA20.2-201ENST00000383922 131 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.33□□□□□ -2.62
SSSCA1O60232 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.33□□□□□ -2.62
SSSCA1O60232 MTATP6P18-201ENST00000417994 673 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 RPS27AP14-201ENST00000422868 454 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.33□□□□□ -2.62
SSSCA1O60232 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.33□□□□□ -2.62
SSSCA1O60232 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.33□□□□□ -2.62
SSSCA1O60232 MTND1P24-201ENST00000552175 861 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 UBL5P4-201ENST00000562584 236 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 MIR4775-201ENST00000581168 75 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 MIR4473-201ENST00000583731 91 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 AL356055.1-201ENST00000602528 446 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 AL391834.2-201ENST00000609982 546 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.33□□□□□ -2.62
SSSCA1O60232 SNORD14E-201ENST00000364009 85 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 MIR601-201ENST00000385256 79 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 USP9YP30-201ENST00000430729 455 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 snoU13.13-201ENST00000458842 104 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 AP003072.1-201ENST00000531740 145 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 MIR3941-201ENST00000582572 103 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 TUSC7.1-201ENST00000610969 165 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 AC104010.1-201ENST00000616889 150 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 U6.115-201ENST00000636045 103 ntBASIC-1.34□□□□□ -2.62
SSSCA1O60232 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.34□□□□□ -2.62
SSSCA1O60232 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 SNORA1.2-201ENST00000365189 134 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 RNU6-169P-201ENST00000365336 107 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 Z82188.1-201ENST00000436709 154 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 MTND3P1-201ENST00000441336 220 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 RNU6-437P-201ENST00000459408 95 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 RNU7-138P-201ENST00000459479 64 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 RNU6-958P-201ENST00000516995 106 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 snoU83B.1-201ENST00000517136 88 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.35□□□□□ -2.63
SSSCA1O60232 AP001282.2-201ENST00000616149 309 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 AC132825.6-201ENST00000638861 357 ntBASIC-1.35□□□□□ -2.63
SSSCA1O60232 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 RNU6-540P-201ENST00000384622 101 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 MIR181B2-201ENST00000385004 89 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 MIR889-201ENST00000401280 79 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.36□□□□□ -2.63
SSSCA1O60232 USMG5P1-201ENST00000425964 177 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.36□□□□□ -2.63
SSSCA1O60232 MTATP6P17-201ENST00000431030 672 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 RNU7-67P-201ENST00000459003 62 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 AP003733.2-201ENST00000529409 171 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.36□□□□□ -2.63
SSSCA1O60232 MIR4770-201ENST00000579149 58 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 MIR5704-201ENST00000584029 77 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 AC080013.3-201ENST00000606839 578 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 MIR8068-201ENST00000618032 68 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 AC072046.2-201ENST00000618366 268 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 AC007671.2-201ENST00000637344 619 ntBASIC-1.36□□□□□ -2.63
SSSCA1O60232 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 RNA5SP403-201ENST00000363598 108 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 RNU7-167P-201ENST00000459160 62 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 RNU7-55P-201ENST00000459426 62 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.37□□□□□ -2.63
SSSCA1O60232 AC134698.4-201ENST00000523451 826 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 AC104576.1-201ENST00000524225 88 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 AP000676.1-201ENST00000533307 52 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.37□□□□□ -2.63
SSSCA1O60232 AC005771.1-201ENST00000585581 349 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 AC064836.2-201ENST00000609491 462 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 SEPT14P19-203ENST00000633205 211 ntBASIC-1.37□□□□□ -2.63
SSSCA1O60232 MIR365A-201ENST00000362260 87 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 RNU6-280P-201ENST00000364145 104 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.38□□□□□ -2.63
SSSCA1O60232 RNU6-325P-201ENST00000411132 105 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 AC016550.1-201ENST00000505348 785 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.38□□□□□ -2.63
SSSCA1O60232 MIR4441-201ENST00000582623 100 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms