Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RPL39P39-201ENST00000455840 151 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 RNU6-437P-201ENST00000459408 95 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 AC117454.1-201ENST00000491120 168 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 SNORA31.4-201ENST00000516049 129 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 SNORD45.4-201ENST00000516629 73 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 RNU6-113P-201ENST00000516653 101 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 RNU2-31P-201ENST00000516954 155 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAF3IP2O43734 AC037487.3-201ENST00000606668 112 ntBASIC0.86□□□□□ -2.27
TRAF3IP2O43734 Y_RNA.153-201ENST00000363615 91 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 Y_RNA.210-201ENST00000364161 110 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 RNU6-144P-201ENST00000383951 107 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 Y_RNA.422-201ENST00000384054 114 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 SNORA53-201ENST00000391141 249 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 MIR1298-201ENST00000408783 112 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 SNORA36B-201ENST00000410438 131 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAF3IP2O43734 RNU6-1007P-201ENST00000516586 107 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 RNU6-1223P-201ENST00000517124 104 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 MIR151B-201ENST00000584249 96 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 AC005357.1-201ENST00000588399 301 ntBASIC0.85□□□□□ -2.27
TRAF3IP2O43734 Y_RNA.19-201ENST00000362462 99 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 RNA5SP327-201ENST00000362494 101 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 RNU6-1084P-201ENST00000362498 107 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 snoU2_19.2-201ENST00000363024 80 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 SNORD50B-201ENST00000364995 70 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 RNU6-514P-201ENST00000384208 107 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 MIR136-201ENST00000385207 82 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
TRAF3IP2O43734 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 SNORA26.5-201ENST00000391215 123 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 RNU2-14P-201ENST00000411053 191 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 SNORD111.1-201ENST00000516421 86 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
TRAF3IP2O43734 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
TRAF3IP2O43734 SNORA25.1-201ENST00000362326 128 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 RNU6-1272P-201ENST00000362776 107 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 RNU6-1209P-201ENST00000363655 107 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 SNORD14E-201ENST00000364009 85 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 SNORA25-201ENST00000384384 134 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.541-201ENST00000384640 113 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
TRAF3IP2O43734 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 MLLT10P1-201ENST00000418346 262 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAF3IP2O43734 MRPS35P2-201ENST00000508242 191 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 SNORA31.2-201ENST00000516019 134 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 RNY3P15-201ENST00000516297 97 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 RNU6-1137P-201ENST00000517073 99 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 SNORA74.3-201ENST00000517108 154 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 AC090142.3-201ENST00000519012 385 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 AP003733.2-201ENST00000529409 171 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 AL512605.2-201ENST00000592972 256 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
TRAF3IP2O43734 UBE2WP1-201ENST00000362030 340 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 RNU6-442P-201ENST00000383968 104 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 RNU6-763P-201ENST00000390865 106 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 RPL21P38-201ENST00000418090 167 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 SNORD11-201ENST00000459124 84 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 NDUFA4P2-201ENST00000489989 244 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 RNU7-43P-201ENST00000516554 64 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 AL442663.2-201ENST00000554385 511 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 AC008507.4-201ENST00000585464 127 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 AC013791.1-201ENST00000616619 62 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 MIR6515-201ENST00000619843 57 ntBASIC0.82□□□□□ -2.28
TRAF3IP2O43734 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAF3IP2O43734 RNU6-1205P-201ENST00000363625 106 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 RNU1-124P-201ENST00000363861 145 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 RNU6-1048P-201ENST00000364054 107 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.217-201ENST00000364214 105 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 MIR613-201ENST00000385248 95 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAF3IP2O43734 SNRPGP14-201ENST00000435400 219 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.641-201ENST00000459414 105 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 AC091959.1-201ENST00000495857 238 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 SNORA70.22-201ENST00000517160 124 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAF3IP2O43734 MIR5688-201ENST00000580619 83 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 BX284668.6-201ENST00000606899 438 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 AL096861.1-201ENST00000610899 123 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 AL391903.3-201ENST00000612158 163 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
TRAF3IP2O43734 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAF3IP2O43734 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.84-201ENST00000363011 104 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 RNU6-806P-201ENST00000365147 105 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 SNORD38C-201ENST00000384381 69 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 MIR19B1-201ENST00000384829 87 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 MIR516B2-201ENST00000385190 85 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 MTCO2P33-201ENST00000402100 465 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 AC113618.1-201ENST00000416747 285 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms