Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNA5SP168-201ENST00000516642 112 ntBASIC2.24□□□□□ -2.05
CBX4O00257 Y_RNA.703-201ENST00000516846 111 ntBASIC2.24□□□□□ -2.05
CBX4O00257 RNU6-548P-201ENST00000517083 115 ntBASIC2.24□□□□□ -2.05
CBX4O00257 MTND5P41-201ENST00000517498 206 ntBASIC2.24□□□□□ -2.05
CBX4O00257 AC097639.2-201ENST00000603159 172 ntBASIC2.24□□□□□ -2.05
CBX4O00257 Y_RNA.778-201ENST00000620203 90 ntBASIC2.24□□□□□ -2.05
CBX4O00257 RNU6-151P-201ENST00000364158 107 ntBASIC2.23□□□□□ -2.05
CBX4O00257 RNY1P5-201ENST00000383890 115 ntBASIC2.23□□□□□ -2.05
CBX4O00257 Y_RNA.393-201ENST00000383936 102 ntBASIC2.23□□□□□ -2.05
CBX4O00257 Y_RNA.506-201ENST00000384494 102 ntBASIC2.23□□□□□ -2.05
CBX4O00257 SNORD37.2-201ENST00000391075 66 ntBASIC2.23□□□□□ -2.05
CBX4O00257 AC244636.1-201ENST00000421152 228 ntBASIC2.23□□□□□ -2.05
CBX4O00257 AC114811.1-201ENST00000507207 168 ntBASIC2.23□□□□□ -2.05
CBX4O00257 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
CBX4O00257 Y_RNA.676-201ENST00000516393 96 ntBASIC2.23□□□□□ -2.05
CBX4O00257 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.23□□□□□ -2.05
CBX4O00257 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.23□□□□□ -2.05
CBX4O00257 AC021506.2-201ENST00000612354 169 ntBASIC2.23□□□□□ -2.05
CBX4O00257 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CBX4O00257 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
CBX4O00257 MIRLET7C-201ENST00000362160 84 ntBASIC2.22□□□□□ -2.05
CBX4O00257 RNU6-199P-201ENST00000362954 107 ntBASIC2.22□□□□□ -2.05
CBX4O00257 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
CBX4O00257 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CBX4O00257 RNU6-482P-201ENST00000391068 107 ntBASIC2.22□□□□□ -2.05
CBX4O00257 U8.16-201ENST00000391279 133 ntBASIC2.22□□□□□ -2.05
CBX4O00257 MIR891A-201ENST00000401237 79 ntBASIC2.22□□□□□ -2.05
CBX4O00257 RNU7-12P-201ENST00000516030 62 ntBASIC2.22□□□□□ -2.05
CBX4O00257 AL773524.1-201ENST00000614065 229 ntBASIC2.22□□□□□ -2.05
CBX4O00257 AL513423.1-201ENST00000621695 132 ntBASIC2.22□□□□□ -2.05
CBX4O00257 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CBX4O00257 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CBX4O00257 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
CBX4O00257 ICE2P2-201ENST00000483823 2787 ntBASIC2.21□□□□□ -2.05
CBX4O00257 RNU6-774P-201ENST00000363238 107 ntBASIC2.21□□□□□ -2.06
CBX4O00257 SNORA25.7-201ENST00000364375 127 ntBASIC2.21□□□□□ -2.06
CBX4O00257 SNORD24-201ENST00000383884 75 ntBASIC2.21□□□□□ -2.06
CBX4O00257 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
CBX4O00257 SNRPGP13-201ENST00000442212 177 ntBASIC2.21□□□□□ -2.06
CBX4O00257 RPL23AP6-201ENST00000446637 472 ntBASIC2.21□□□□□ -2.06
CBX4O00257 HMGN2P23-201ENST00000456759 269 ntBASIC2.21□□□□□ -2.06
CBX4O00257 RNU6-1116P-201ENST00000517269 99 ntBASIC2.21□□□□□ -2.06
CBX4O00257 MIR3646-201ENST00000578301 84 ntBASIC2.21□□□□□ -2.06
CBX4O00257 MIR3133-201ENST00000583157 78 ntBASIC2.21□□□□□ -2.06
CBX4O00257 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.21□□□□□ -2.06
CBX4O00257 MIR6844-201ENST00000637122 62 ntBASIC2.21□□□□□ -2.06
CBX4O00257 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.21□□□□□ -2.06
CBX4O00257 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CBX4O00257 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
CBX4O00257 RNU6-833P-201ENST00000363486 107 ntBASIC2.2□□□□□ -2.06
CBX4O00257 RNU6-414P-201ENST00000363705 104 ntBASIC2.2□□□□□ -2.06
CBX4O00257 RNU6-597P-201ENST00000365620 102 ntBASIC2.2□□□□□ -2.06
CBX4O00257 Y_RNA.400-201ENST00000383963 111 ntBASIC2.2□□□□□ -2.06
CBX4O00257 SNORD38C-201ENST00000384381 69 ntBASIC2.2□□□□□ -2.06
CBX4O00257 RNU6-768P-201ENST00000384683 107 ntBASIC2.2□□□□□ -2.06
CBX4O00257 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
CBX4O00257 AC006441.5-201ENST00000612680 209 ntBASIC2.2□□□□□ -2.06
CBX4O00257 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
CBX4O00257 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CBX4O00257 RNU4-11P-201ENST00000365287 132 ntBASIC2.19□□□□□ -2.06
CBX4O00257 RNU6-125P-201ENST00000384505 107 ntBASIC2.19□□□□□ -2.06
CBX4O00257 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
CBX4O00257 PGBD4P5-201ENST00000445958 426 ntBASIC2.19□□□□□ -2.06
CBX4O00257 Y_RNA.666-201ENST00000516187 112 ntBASIC2.19□□□□□ -2.06
CBX4O00257 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
CBX4O00257 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
CBX4O00257 SNORD3E-202ENST00000627253 216 ntBASIC2.19□□□□□ -2.06
CBX4O00257 Y_RNA.66-201ENST00000362862 102 ntBASIC2.18□□□□□ -2.06
CBX4O00257 RNU6-268P-201ENST00000364174 107 ntBASIC2.18□□□□□ -2.06
CBX4O00257 RNU6-978P-201ENST00000364371 103 ntBASIC2.18□□□□□ -2.06
CBX4O00257 MIR660-201ENST00000385235 97 ntBASIC2.18□□□□□ -2.06
CBX4O00257 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
CBX4O00257 SNORA75.5-201ENST00000391291 81 ntBASIC2.18□□□□□ -2.06
CBX4O00257 AC099513.1-201ENST00000490423 301 ntBASIC2.18□□□□□ -2.06
CBX4O00257 RNU6-693P-201ENST00000516134 107 ntBASIC2.18□□□□□ -2.06
CBX4O00257 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.18□□□□□ -2.06
CBX4O00257 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
CBX4O00257 MIR3658-201ENST00000636291 56 ntBASIC2.18□□□□□ -2.06
CBX4O00257 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CBX4O00257 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
CBX4O00257 MIR424-201ENST00000362227 98 ntBASIC2.17□□□□□ -2.06
CBX4O00257 RNU6-1123P-201ENST00000362347 106 ntBASIC2.17□□□□□ -2.06
CBX4O00257 RNU6-888P-201ENST00000363010 101 ntBASIC2.17□□□□□ -2.06
CBX4O00257 Y_RNA.488-201ENST00000384403 102 ntBASIC2.17□□□□□ -2.06
CBX4O00257 MIR513C-201ENST00000401352 84 ntBASIC2.17□□□□□ -2.06
CBX4O00257 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.17□□□□□ -2.06
CBX4O00257 RNU6-1270P-201ENST00000517128 108 ntBASIC2.17□□□□□ -2.06
CBX4O00257 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CBX4O00257 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CBX4O00257 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
CBX4O00257 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CBX4O00257 Y_RNA.215-201ENST00000364204 112 ntBASIC2.16□□□□□ -2.06
CBX4O00257 Y_RNA.343-201ENST00000365354 112 ntBASIC2.16□□□□□ -2.06
CBX4O00257 SNORD61-201ENST00000384252 73 ntBASIC2.16□□□□□ -2.06
CBX4O00257 MIR452-201ENST00000385020 85 ntBASIC2.16□□□□□ -2.06
CBX4O00257 MIR548O-201ENST00000408583 114 ntBASIC2.16□□□□□ -2.06
CBX4O00257 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.16□□□□□ -2.06
CBX4O00257 RNU6-346P-201ENST00000516288 111 ntBASIC2.16□□□□□ -2.06
CBX4O00257 AC090142.3-201ENST00000519012 385 ntBASIC2.16□□□□□ -2.06
CBX4O00257 AC112693.2-201ENST00000556538 232 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms